Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96035 | Canola | cytosol, peroxisome, plastid | 83.12 | 83.65 |
| CDY01904 | Canola | cytosol, peroxisome, plastid | 81.88 | 82.39 |
| Bra004295.1-P | Field mustard | cytosol, peroxisome, plastid | 83.75 | 67.68 |
| GSMUA_Achr3P29470_001 | Banana | cytosol | 54.38 | 55.06 |
| GSMUA_Achr4P06800_001 | Banana | cytosol | 54.38 | 54.04 |
| TraesCS2D01G502700.1 | Wheat | cytosol, plastid | 48.75 | 47.56 |
| TraesCS2A01G502200.1 | Wheat | cytosol, plastid | 48.12 | 46.95 |
| TraesCS2B01G530300.1 | Wheat | cytosol, plastid | 47.5 | 46.34 |
| OQU75645 | Sorghum | cytosol, peroxisome, plastid | 48.75 | 43.82 |
| KXG33084 | Sorghum | cytosol, peroxisome, plastid | 48.75 | 43.82 |
| Os01t0511100-01 | Rice | plastid | 45.0 | 43.11 |
| Zm00001d043912_P002 | Maize | cytosol, plasma membrane, plastid | 50.0 | 42.78 |
| VIT_01s0011g03680.t01 | Wine grape | cytosol | 44.38 | 41.76 |
| HORVU2Hr1G111600.2 | Barley | cytosol | 47.5 | 34.86 |
| AT1G09740.1 | Thale cress | cytosol | 35.62 | 33.33 |
| AT3G62550.1 | Thale cress | cytosol | 30.62 | 30.25 |
| AT2G47710.1 | Thale cress | cytosol | 28.12 | 27.78 |
| AT3G58450.1 | Thale cress | cytosol | 35.0 | 27.45 |
| AT3G01520.1 | Thale cress | cytosol | 29.38 | 26.86 |
| AT5G14680.1 | Thale cress | cytosol, nucleus, plastid | 28.75 | 26.29 |
| AT3G11930.3 | Thale cress | cytosol | 31.88 | 22.57 |
| AT5G49050.1 | Thale cress | cytosol | 14.38 | 15.33 |
Protein Annotations
| Gene3D:3.40.50.620 | MapMan:35.1 | EntrezGene:843159 | UniProt:A0A178W6R0 | ProteinID:AAG52594.1 | ProteinID:AEE34778.1 |
| EMBL:AK228062 | ArrayExpress:AT1G68300 | EnsemblPlantsGene:AT1G68300 | RefSeq:AT1G68300 | TAIR:AT1G68300 | RefSeq:AT1G68300-TAIR-G |
| EnsemblPlants:AT1G68300.1 | TAIR:AT1G68300.1 | EMBL:AY086731 | Unigene:At.43330 | EMBL:BT005207 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0016787 | InterPro:IPR014729 | RefSeq:NP_564927.1 |
| ProteinID:OAP13083.1 | PFAM:PF00582 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR01438 | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF6 | UniProt:Q9C9G5 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF52402 |
| UniParc:UPI000000C57F | InterPro:Universal_stress_UspA | InterPro:UspA | : | : | : |
Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9G5]
Coordinates
chr1:-:25598331..25599350
Molecular Weight (calculated)
17332.9 Da
IEP (calculated)
5.708
GRAVY (calculated)
-0.034
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEEKSVMK QVMVAIDESE CSKRALQWTL VYLKDSLADS DIILFTAQPH LDLSCVYASS YGAAPIELIN SLQESHKNAG LNRLDEGTKI CAETGVTPRK
101: VLEFGNPKEA ICEAAEKLGV DMLVVGSHGK GALQRTFLGS VSNYCVNNAK CPVLVVRTKA
101: VLEFGNPKEA ICEAAEKLGV DMLVVGSHGK GALQRTFLGS VSNYCVNNAK CPVLVVRTKA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.