Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008745.1-P | Field mustard | cytosol | 93.71 | 93.71 |
| CDY09876 | Canola | cytosol | 93.14 | 93.14 |
| CDX69566 | Canola | cytosol | 90.29 | 87.78 |
| AT3G01520.1 | Thale cress | cytosol | 80.57 | 80.57 |
| PGSC0003DMT400080606 | Potato | cytosol | 80.57 | 80.57 |
| Solyc12g062860.1.1 | Tomato | cytosol, extracellular | 79.43 | 79.43 |
| VIT_14s0066g01130.t01 | Wine grape | cytosol | 77.14 | 77.14 |
| KRH56590 | Soybean | cytosol, nucleus | 74.29 | 74.29 |
| Zm00001d051584_P001 | Maize | cytosol, extracellular | 74.29 | 73.45 |
| EES05648 | Sorghum | cytosol | 74.29 | 73.45 |
| KRG93269 | Soybean | cytosol, nucleus | 73.14 | 73.14 |
| TraesCS6D01G254400.1 | Wheat | cytosol | 73.71 | 72.88 |
| TraesCS6B01G301700.1 | Wheat | cytosol | 73.14 | 72.32 |
| TraesCS6A01G274200.1 | Wheat | cytosol | 73.14 | 72.32 |
| TraesCS6B01G312700.1 | Wheat | cytosol | 72.57 | 71.75 |
| GSMUA_Achr1P26770_001 | Banana | cytosol | 66.29 | 69.46 |
| HORVU6Hr1G069260.1 | Barley | vacuole | 71.43 | 61.58 |
| AT1G68300.1 | Thale cress | cytosol, peroxisome, plastid | 26.29 | 28.75 |
| AT1G09740.1 | Thale cress | cytosol | 25.71 | 26.32 |
| AT3G62550.1 | Thale cress | cytosol | 24.0 | 25.93 |
| AT3G58450.1 | Thale cress | cytosol | 29.14 | 25.0 |
| AT2G47710.1 | Thale cress | cytosol | 22.29 | 24.07 |
| AT3G11930.3 | Thale cress | cytosol | 26.86 | 20.8 |
| AT5G49050.1 | Thale cress | cytosol | 12.57 | 14.67 |
Protein Annotations
| Gene3D:3.40.50.620 | MapMan:35.1 | EntrezGene:831320 | UniProt:A0A178UPL4 | ProteinID:AED92062.1 | ArrayExpress:AT5G14680 |
| EnsemblPlantsGene:AT5G14680 | RefSeq:AT5G14680 | TAIR:AT5G14680 | RefSeq:AT5G14680-TAIR-G | EnsemblPlants:AT5G14680.1 | TAIR:AT5G14680.1 |
| EMBL:BT011776 | EMBL:BT015743 | ProteinID:CAB87635.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0016787 | InterPro:IPR014729 | RefSeq:NP_196972.1 | ProteinID:OAO95450.1 | PFAM:PF00582 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR01438 | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF49 | UniProt:Q9LYJ2 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF52402 |
| UniParc:UPI00000A7429 | InterPro:Universal_stress_UspA | InterPro:UspA | : | : | : |
Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ2]
Coordinates
chr5:-:4730836..4733225
Molecular Weight (calculated)
19795.7 Da
IEP (calculated)
6.780
GRAVY (calculated)
-0.382
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MESEPTRVMV AVNESTLKGY PHASISSKKA FEWTLKKIVR SNTSGFKLLL LHVQVQDEDG FDDMDSIYAS PDDFRQMRER NKAKGLHLLE FFVKKCHDIG
101: VGCEAWIRKG DPTELICHEV RRVRPDFLVV GSRGLGPFQK VFVGTVSEFC VKHAECPVIT IKRTAEESPQ DPADD
101: VGCEAWIRKG DPTELICHEV RRVRPDFLVV GSRGLGPFQK VFVGTVSEFC VKHAECPVIT IKRTAEESPQ DPADD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.