CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051584_P001	Maize	cytosol, extracellular	98.87	98.87
TraesCS6D01G254400.1	Wheat	cytosol	89.27	89.27
TraesCS6B01G301700.1	Wheat	cytosol	88.14	88.14
TraesCS6A01G274200.1	Wheat	cytosol	88.14	88.14
TraesCS6B01G312700.1	Wheat	cytosol	87.57	87.57
PGSC0003DMT400080606	Potato	cytosol	76.27	77.14
GSMUA_Achr1P26770_001	Banana	cytosol	72.32	76.65
VIT_14s0066g01130.t01	Wine grape	cytosol	75.14	76.0
Solyc12g062860.1.1	Tomato	cytosol, extracellular	74.58	75.43
HORVU6Hr1G069260.1	Barley	vacuole	85.88	74.88
AT5G14680.1	Thale cress	cytosol, nucleus, plastid	73.45	74.29
KRG93269	Soybean	cytosol, nucleus	72.88	73.71
CDY09876	Canola	cytosol	72.32	73.14
Bra008745.1-P	Field mustard	cytosol	71.75	72.57
KRH56590	Soybean	cytosol, nucleus	71.75	72.57
AT3G01520.1	Thale cress	cytosol	69.49	70.29
CDX69566	Canola	cytosol	69.49	68.33
CDY49062	Canola	cytosol	67.23	68.0
Bra039110.1-P	Field mustard	cytosol	65.54	67.44
CDY37513	Canola	cytosol	65.54	67.44
EES07563	Sorghum	cytosol	27.12	29.63
EES00637	Sorghum	cytosol	26.55	28.48
OQU75645	Sorghum	cytosol, peroxisome, plastid	27.68	27.53
KXG33084	Sorghum	cytosol, peroxisome, plastid	27.68	27.53
EER92231	Sorghum	plastid	27.68	25.26
EER92378	Sorghum	cytosol	23.73	23.86
EER93447	Sorghum	cytosol	23.16	21.24
EES17172	Sorghum	cytosol	20.9	21.02
OQU79284	Sorghum	mitochondrion	19.77	18.82
KXG31856	Sorghum	cytosol	20.34	16.44
OQU91731	Sorghum	plastid	25.42	14.24

Protein Annotations

EnsemblPlants:EES05648	EnsemblPlantsGene:SORBI_3004G266000	EntrezGene:8073154	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF49
PFAM:PF00582	PRINTS:PR01438	ProteinID:EES05648	ProteinID:EES05648.1	RefSeq:XP_002452672.1	SUPFAM:SSF52402
unigene:Sbi.7280	UniParc:UPI0001A85D7F	UniProt:C5Y0A3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr4:+:61049910..61055835

Molecular Weight (calculated)

19971.9 Da

IEP (calculated)

6.502

GRAVY (calculated)

-0.306

Length

177 amino acids

Sequence
(BLAST)

001: MADSSAPTRV MMAVNESSLK GYPHPSISCR TAFDWTLSKL VRSNPGGFHF LFIHVQVPDE DGFDDMDSIY ASPEDFHQMK RRDKIRGLHL LEYFVNQCHQ
101: LGIKCEAWIR HGDPKEVICS EVKRVQPDLL VVGSRGLGPF QRVFVGTVSE FCVKHAECPV ITIKRNATEA PQDPVDD

Best Arabidopsis Sequence Match ( AT5G14680.1 )
(BLAST)

001: MESEPTRVMV AVNESTLKGY PHASISSKKA FEWTLKKIVR SNTSGFKLLL LHVQVQDEDG FDDMDSIYAS PDDFRQMRER NKAKGLHLLE FFVKKCHDIG
101: VGCEAWIRKG DPTELICHEV RRVRPDFLVV GSRGLGPFQK VFVGTVSEFC VKHAECPVIT IKRTAEESPQ DPADD

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ2]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.