CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0437500-01	Rice	cytosol, plasma membrane, plastid	40.51	70.72
HORVU5Hr1G047510.1	Barley	cytosol	37.34	62.43
TraesCS5B01G150100.1	Wheat	cytosol	37.03	61.9
TraesCS5D01G156700.1	Wheat	cytosol	37.34	61.78
TraesCS5A01G151500.2	Wheat	cytosol	37.34	61.46
CDY53924	Canola	cytosol	12.97	57.75
CDX73846	Canola	cytosol	12.97	57.75
GSMUA_Achr2P08790_001	Banana	cytosol	27.53	46.77
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	18.99	46.51
CDY01070	Canola	cytosol	22.47	43.29
Solyc01g057000.2.1	Tomato	cytosol	23.1	42.44
Bra001427.1-P	Field mustard	cytosol	26.27	41.92
PGSC0003DMT400084231	Potato	cytosol	23.73	41.9
GSMUA_Achr3P25610_001	Banana	cytosol	25.32	41.88
Bra038688.1-P	Field mustard	cytosol	26.27	41.5
KRH71765	Soybean	endoplasmic reticulum	25.0	41.36
CDY08481	Canola	cytosol	25.95	41.0
CDY47907	Canola	cytosol	25.95	41.0
EER93447	Sorghum	cytosol	24.68	40.41
AT3G58450.1	Thale cress	cytosol	25.95	40.2
Bra034800.1-P	Field mustard	cytosol	24.68	39.0
CDY08484	Canola	cytosol	24.68	39.0
EES17172	Sorghum	cytosol	21.52	38.64
CDX67744	Canola	cytosol	24.37	38.31
Bra003338.1-P	Field mustard	cytosol	24.05	37.25
CDX98295	Canola	cytosol	22.78	37.11
EES00637	Sorghum	cytosol	19.3	36.97
CDY06041	Canola	cytosol	22.15	36.84
Bra007393.1-P	Field mustard	cytosol	22.15	36.84
AT3G11930.3	Thale cress	cytosol	26.27	36.73
CDX71957	Canola	cytosol	22.15	36.65
EES07563	Sorghum	cytosol	18.35	35.8
KXG31856	Sorghum	cytosol	24.68	35.62
KXG33084	Sorghum	cytosol, peroxisome, plastid	18.99	33.71
OQU75645	Sorghum	cytosol, peroxisome, plastid	18.99	33.71
EER92231	Sorghum	plastid	20.25	32.99
EER92378	Sorghum	cytosol	16.77	30.11
OQU79284	Sorghum	mitochondrion	17.09	29.03
EES05648	Sorghum	cytosol	14.24	25.42

Protein Annotations

EnsemblPlants:OQU91731	EnsemblPlantsGene:SORBI_3001G239601	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF15	PFAM:PF00582
PRINTS:PR01438	ProteinID:OQU91731	ProteinID:OQU91731.1	SEG:seg	SUPFAM:SSF52402	UniParc:UPI000B8BB0A3
UniProt:A0A1Z5S727	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:24621215..24622883

Molecular Weight (calculated)

35052.0 Da

IEP (calculated)

8.952

GRAVY (calculated)

-0.393

Length

316 amino acids

Sequence
(BLAST)

001: MEIGAKIAYT RADGQYGYSG RVSHGRKPRE CRSRTTAGGD RVPWRLPRLS APRRRSICVS CMPAWQTRTT RNDPDMPCTC TRVTATLASI DRVYPLRPYR
101: TSSIYIYIYI GVHVYYIDDA IQQSEKSLTG VRERETQERA TTMTMKVLVA VDDSDGSRHA LAWVLDHLFP AAEQPHQEEP QPALVLVHAQ EPLRHVMMYP
201: VGPGSAVYGA PSMMERVRAA QAENARNLLD RANQICHRRG VSAECVVVEG DPREALCRAA QDMGAGLLVV GSRGLGAIKR AFLGSVSDYC AQHASCPIMV
301: VKPPPRENEH AHRATT

Best Arabidopsis Sequence Match ( AT3G11930.2 )
(BLAST)

001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK

Arabidopsis Description

AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.