Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038688.1-P | Field mustard | cytosol | 77.43 | 87.5 |
| CDY47907 | Canola | cytosol | 76.55 | 86.5 |
| CDY08481 | Canola | cytosol | 76.55 | 86.5 |
| CDY01070 | Canola | cytosol | 59.29 | 81.71 |
| CDY08484 | Canola | cytosol | 71.68 | 81.0 |
| Bra034800.1-P | Field mustard | cytosol | 71.24 | 80.5 |
| VIT_08s0032g00590.t01 | Wine grape | cytosol, plastid | 36.28 | 63.57 |
| Solyc01g057000.2.1 | Tomato | cytosol | 40.71 | 53.49 |
| PGSC0003DMT400084231 | Potato | cytosol | 42.04 | 53.07 |
| KRH71765 | Soybean | endoplasmic reticulum | 41.59 | 49.21 |
| TraesCS5A01G389700.1 | Wheat | cytosol | 38.05 | 48.04 |
| AT3G58450.1 | Thale cress | cytosol | 42.04 | 46.57 |
| TraesCS5D01G399600.1 | Wheat | cytosol | 38.05 | 46.24 |
| GSMUA_Achr2P08790_001 | Banana | cytosol | 37.17 | 45.16 |
| HORVU5Hr1G095160.1 | Barley | peroxisome | 37.17 | 45.16 |
| HORVU5Hr1G095180.3 | Barley | cytosol | 36.73 | 44.86 |
| GSMUA_Achr3P25610_001 | Banana | cytosol | 37.17 | 43.98 |
| TraesCS5A01G389500.1 | Wheat | cytosol | 34.96 | 43.17 |
| Os10t0437500-01 | Rice | cytosol, plasma membrane, plastid | 34.07 | 42.54 |
| Zm00001d034027_P001 | Maize | cytosol | 33.63 | 40.86 |
| TraesCS5B01G394700.1 | Wheat | cytosol | 32.74 | 40.0 |
| TraesCS5D01G399400.2 | Wheat | cytosol | 36.28 | 39.61 |
| TraesCS5B01G394600.1 | Wheat | cytosol | 37.17 | 38.53 |
| TraesCS5A01G389400.2 | Wheat | cytosol | 35.4 | 38.46 |
| EER93447 | Sorghum | cytosol | 32.74 | 38.34 |
| HORVU5Hr1G047510.1 | Barley | cytosol | 30.53 | 36.51 |
| AT2G47710.1 | Thale cress | cytosol | 26.11 | 36.42 |
| TraesCS5D01G399500.1 | Wheat | cytosol | 32.74 | 36.27 |
| TraesCS5A01G151500.2 | Wheat | cytosol | 30.53 | 35.94 |
| AT1G09740.1 | Thale cress | cytosol | 26.55 | 35.09 |
| TraesCS5D01G156700.1 | Wheat | cytosol | 29.65 | 35.08 |
| TraesCS5B01G150100.1 | Wheat | cytosol | 29.2 | 34.92 |
| AT3G62550.1 | Thale cress | cytosol | 24.34 | 33.95 |
| AT1G68300.1 | Thale cress | cytosol, peroxisome, plastid | 22.57 | 31.88 |
| AT5G14680.1 | Thale cress | cytosol, nucleus, plastid | 20.8 | 26.86 |
| OQU91731 | Sorghum | plastid | 36.73 | 26.27 |
| AT3G01520.1 | Thale cress | cytosol | 19.03 | 24.57 |
| AT5G49050.1 | Thale cress | cytosol | 12.83 | 19.33 |
Protein Annotations
| Gene3D:3.40.50.620 | MapMan:35.2 | EntrezGene:820366 | ProteinID:AEE75120.1 | EMBL:AK317047 | ArrayExpress:AT3G11930 |
| EnsemblPlantsGene:AT3G11930 | RefSeq:AT3G11930 | TAIR:AT3G11930 | RefSeq:AT3G11930-TAIR-G | EnsemblPlants:AT3G11930.3 | TAIR:AT3G11930.3 |
| Unigene:At.5410 | UniProt:B9DG73 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | InterPro:IPR014729 | RefSeq:NP_850563.1 |
| PFAM:PF00582 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01438 |
| PANTHER:PTHR31964 | PANTHER:PTHR31964:SF15 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF52402 | TMHMM:TMhelix | UniParc:UPI0000196C21 |
| InterPro:Universal_stress_UspA | InterPro:UspA | SEG:seg | : | : | : |
Description
AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
Coordinates
chr3:+:3776237..3777694
Molecular Weight (calculated)
24758.9 Da
IEP (calculated)
6.239
GRAVY (calculated)
0.106
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RYCIINNFFL YINLSAYYFV CFVRFGRAFL
201: GSVSDYCAHH ANCPILIVKP PKEMTK
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RYCIINNFFL YINLSAYYFV CFVRFGRAFL
201: GSVSDYCAHH ANCPILIVKP PKEMTK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.