Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400080606 | Potato | cytosol | 97.71 | 97.71 |
| KRH56590 | Soybean | cytosol, nucleus | 81.14 | 81.14 |
| Bra008745.1-P | Field mustard | cytosol | 80.57 | 80.57 |
| KRG93269 | Soybean | cytosol, nucleus | 80.57 | 80.57 |
| CDY09876 | Canola | cytosol | 80.0 | 80.0 |
| AT5G14680.1 | Thale cress | cytosol, nucleus, plastid | 79.43 | 79.43 |
| VIT_14s0066g01130.t01 | Wine grape | cytosol | 79.43 | 79.43 |
| TraesCS6D01G254400.1 | Wheat | cytosol | 77.14 | 76.27 |
| TraesCS6B01G301700.1 | Wheat | cytosol | 76.57 | 75.71 |
| TraesCS6A01G274200.1 | Wheat | cytosol | 76.57 | 75.71 |
| CDX69566 | Canola | cytosol | 77.71 | 75.56 |
| TraesCS6B01G312700.1 | Wheat | cytosol | 76.0 | 75.14 |
| Bra039110.1-P | Field mustard | cytosol | 73.71 | 75.0 |
| CDY37513 | Canola | cytosol | 73.71 | 75.0 |
| Zm00001d051584_P001 | Maize | cytosol, extracellular | 75.43 | 74.58 |
| EES05648 | Sorghum | cytosol | 75.43 | 74.58 |
| CDY49062 | Canola | cytosol | 74.29 | 74.29 |
| AT3G01520.1 | Thale cress | cytosol | 74.29 | 74.29 |
| GSMUA_Achr1P26770_001 | Banana | cytosol | 70.29 | 73.65 |
| HORVU6Hr1G069260.1 | Barley | vacuole | 75.43 | 65.02 |
| Solyc04g076200.2.1 | Tomato | cytosol, extracellular, plastid | 25.71 | 29.61 |
| Solyc06g009050.2.1 | Tomato | cytosol, nucleus | 25.71 | 27.95 |
| Solyc01g100370.2.1 | Tomato | cytosol | 25.71 | 27.11 |
| Solyc01g066810.2.1 | Tomato | cytosol | 24.0 | 26.58 |
| Solyc01g057000.2.1 | Tomato | cytosol | 25.14 | 25.58 |
| Solyc06g084540.2.1 | Tomato | cytosol | 22.86 | 25.48 |
| Solyc12g099520.1.1 | Tomato | cytosol | 22.29 | 24.38 |
| Solyc05g054270.2.1 | Tomato | cytosol | 21.71 | 24.05 |
Protein Annotations
| EMBL:GQ261266 | EnsemblPlants:Solyc12g062860.1.1 | EnsemblPlantsGene:Solyc12g062860.1 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF49 |
| PFAM:PF00582 | PRINTS:PR01438 | SUPFAM:SSF52402 | UniParc:UPI000243C671 | UniProt:G8Z288 | MapMan:35.1 |
Description
Hop-interacting protein THI141 [Source:UniProtKB/TrEMBL;Acc:G8Z288]
Coordinates
chr12:+:35499760..35507962
Molecular Weight (calculated)
19518.5 Da
IEP (calculated)
6.774
GRAVY (calculated)
-0.209
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEATRVMV AVNESTIKGY PHASISSKGA FEWTLNKIVR SNTSGFKLLF LHVQVPDEDG FEDMDSIFAS PDDFKGMKNR NKIRGLHLVE YFVNRCHEIG
101: VPCEAWIKKG DPKEVICHEV KRVQPDLLVV GCRGLGPFQR VFVGTVSEFC LKHAECPVVT IKRSAAETPQ DPIDD
101: VPCEAWIKKG DPKEVICHEV KRVQPDLLVV GCRGLGPFQR VFVGTVSEFC LKHAECPVVT IKRSAAETPQ DPIDD
001: MESEPTRVMV AVNESTLKGY PHASISSKKA FEWTLKKIVR SNTSGFKLLL LHVQVQDEDG FDDMDSIYAS PDDFRQMRER NKAKGLHLLE FFVKKCHDIG
101: VGCEAWIRKG DPTELICHEV RRVRPDFLVV GSRGLGPFQK VFVGTVSEFC VKHAECPVIT IKRTAEESPQ DPADD
101: VGCEAWIRKG DPTELICHEV RRVRPDFLVV GSRGLGPFQK VFVGTVSEFC VKHAECPVIT IKRTAEESPQ DPADD
Arabidopsis Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ2]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.