Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
25464976
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc04g015760.2.1 | |
| Solyc06g009050.2.1 | |
| Solyc06g051930.2.1 | |
| Solyc06g084540.2.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037920 | Potato | cytosol | 95.65 | 95.65 |
| CDY27474 | Canola | cytosol | 29.81 | 75.0 |
| GSMUA_Achr5P00180_001 | Banana | cytosol | 66.46 | 69.48 |
| Solyc06g084540.2.1 | Tomato | cytosol | 67.08 | 68.79 |
| CDY53014 | Canola | cytosol | 64.6 | 64.2 |
| GSMUA_Achr6P20400_001 | Banana | cytosol | 60.87 | 63.64 |
| AT2G47710.1 | Thale cress | cytosol | 63.35 | 62.96 |
| CDX80128 | Canola | cytosol | 63.35 | 62.96 |
| Bra004435.1-P | Field mustard | cytosol | 63.35 | 62.96 |
| CDX95730 | Canola | cytosol | 62.11 | 61.73 |
| CDX83322 | Canola | cytosol | 62.11 | 61.73 |
| CDY55534 | Canola | cytosol | 62.11 | 61.73 |
| Bra021440.1-P | Field mustard | cytosol | 62.11 | 61.73 |
| Bra000458.1-P | Field mustard | cytosol | 62.11 | 61.73 |
| Solyc05g054270.2.1 | Tomato | cytosol | 59.01 | 60.13 |
| KRG96437 | Soybean | cytosol | 59.63 | 58.9 |
| Solyc01g066810.2.1 | Tomato | cytosol | 57.76 | 58.86 |
| GSMUA_Achr8P06640_001 | Banana | cytosol | 58.39 | 58.75 |
| KRH71566 | Soybean | cytosol | 57.14 | 58.23 |
| KRH31878 | Soybean | cytosol | 58.39 | 57.32 |
| Os12t0552400-01 | Rice | cytosol | 55.28 | 55.62 |
| TraesCS5D01G104200.1 | Wheat | cytosol | 57.76 | 55.03 |
| TraesCS5B01G097600.1 | Wheat | cytosol | 57.76 | 55.03 |
| Solyc12g099520.1.1 | Tomato | cytosol | 54.04 | 54.38 |
| Zm00001d023830_P001 | Maize | cytosol, extracellular, mitochondrion | 57.14 | 53.8 |
| TraesCS5A01G092000.1 | Wheat | cytosol | 57.14 | 53.49 |
| EES17172 | Sorghum | cytosol | 57.76 | 52.84 |
| Os12t0552500-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 55.28 | 52.66 |
| HORVU5Hr1G024160.3 | Barley | cytosol | 57.14 | 52.57 |
| Zm00001d041638_P001 | Maize | cytosol | 56.52 | 51.7 |
| OQU79284 | Sorghum | mitochondrion | 53.42 | 46.24 |
| TraesCS5A01G092100.1 | Wheat | cytosol | 54.04 | 43.28 |
| TraesCS5B01G097500.1 | Wheat | cytosol | 54.04 | 43.28 |
| TraesCS5D01G104300.1 | Wheat | cytosol | 53.42 | 42.79 |
| HORVU5Hr1G024170.1 | Barley | cytosol | 53.42 | 42.57 |
| Solyc01g100370.2.1 | Tomato | cytosol | 40.37 | 39.16 |
| Solyc04g076200.2.1 | Tomato | cytosol, extracellular, plastid | 36.02 | 38.16 |
| VIT_07s0005g00290.t01 | Wine grape | cytosol | 70.19 | 33.53 |
| Solyc01g057000.2.1 | Tomato | cytosol | 32.3 | 30.23 |
| Solyc12g062860.1.1 | Tomato | cytosol, extracellular | 27.95 | 25.71 |
Protein Annotations
| EnsemblPlants:Solyc06g009050.2.1 | EnsemblPlantsGene:Solyc06g009050.2 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 | InterPro:IPR014729 |
| InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF16 | PFAM:PF00582 |
| PRINTS:PR01438 | SUPFAM:SSF52402 | UniParc:UPI0002766B09 | UniProt:K4C3T5 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6:+:2979605..2982262
Molecular Weight (calculated)
17484.2 Da
IEP (calculated)
7.598
GRAVY (calculated)
0.109
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEKSVMVV GLEDNQHSFY ALEWTLDHFF TNYNSNSPFK LVILHAKPTP ASVIGLAVGP GSVEAFSAIE SNLKKIAARV VEKAKEICKE KSVNDVVVEI
101: VEGDARHVLC EAVEKLHASV LVVGCHGYGV IKRTVLGSVS DYCAHHAHCS VMIVKKPKTK A
101: VEGDARHVLC EAVEKLHASV LVVGCHGYGV IKRTVLGSVS DYCAHHAHCS VMIVKKPKTK A
001: MATGDGKSVM VVGVDDSEQS TYALEWTLDR FFAPYAPNYP FKLFIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAAK VVEKAKAICQ SRSVHGAVIE
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV
Arabidopsis Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82240]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.