Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_07s0005g00290.t01 | |
| VIT_08s0007g08710.t01 | |
| VIT_16s0050g02660.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G47710.1 | VIT_08s0007g08710.t01 | AT2G41760.1 | 21798944 |
| AT2G47710.1 | VIT_07s0005g00290.t01 | AT2G47710.1 | 21798944 |
| AT2G47710.1 | VIT_16s0050g02660.t01 | AT3G49160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27474 | Canola | cytosol | 15.43 | 81.25 |
| GSMUA_Achr5P00180_001 | Banana | cytosol | 37.09 | 81.17 |
| PGSC0003DMT400061758 | Potato | cytosol | 35.31 | 75.8 |
| GSMUA_Achr6P20400_001 | Banana | cytosol | 34.42 | 75.32 |
| Solyc06g084540.2.1 | Tomato | cytosol | 34.72 | 74.52 |
| AT2G47710.1 | Thale cress | cytosol | 35.01 | 72.84 |
| Bra004435.1-P | Field mustard | cytosol | 34.72 | 72.22 |
| CDX80128 | Canola | cytosol | 34.72 | 72.22 |
| Bra000458.1-P | Field mustard | cytosol | 34.42 | 71.6 |
| CDY53014 | Canola | cytosol | 34.42 | 71.6 |
| CDX95730 | Canola | cytosol | 34.42 | 71.6 |
| CDX83322 | Canola | cytosol | 34.42 | 71.6 |
| GSMUA_Achr8P06640_001 | Banana | cytosol | 33.83 | 71.25 |
| PGSC0003DMT400037920 | Potato | cytosol | 33.83 | 70.81 |
| Solyc06g009050.2.1 | Tomato | cytosol, nucleus | 33.53 | 70.19 |
| CDY55534 | Canola | cytosol | 33.53 | 69.75 |
| Bra021440.1-P | Field mustard | cytosol | 33.53 | 69.75 |
| VIT_05s0020g01190.t01 | Wine grape | cytosol | 32.34 | 68.99 |
| KRG96437 | Soybean | cytosol | 33.23 | 68.71 |
| Os12t0552500-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 34.12 | 68.05 |
| KRH71566 | Soybean | cytosol | 31.75 | 67.72 |
| Zm00001d023830_P001 | Maize | cytosol, extracellular, mitochondrion | 34.12 | 67.25 |
| TraesCS5B01G097600.1 | Wheat | cytosol | 33.53 | 66.86 |
| TraesCS5D01G104200.1 | Wheat | cytosol | 33.53 | 66.86 |
| EES17172 | Sorghum | cytosol | 34.72 | 66.48 |
| KRH31878 | Soybean | cytosol | 32.34 | 66.46 |
| TraesCS5A01G092000.1 | Wheat | cytosol | 33.83 | 66.28 |
| HORVU5Hr1G024160.3 | Barley | cytosol | 33.53 | 64.57 |
| Os12t0552400-01 | Rice | cytosol | 28.78 | 60.62 |
| Zm00001d041638_P001 | Maize | cytosol | 28.49 | 54.55 |
| TraesCS5D01G104300.1 | Wheat | cytosol | 30.86 | 51.74 |
| TraesCS5B01G097500.1 | Wheat | cytosol | 30.86 | 51.74 |
| TraesCS5A01G092100.1 | Wheat | cytosol | 30.56 | 51.24 |
| HORVU5Hr1G024170.1 | Barley | cytosol | 30.56 | 50.99 |
| OQU79284 | Sorghum | mitochondrion | 26.71 | 48.39 |
| VIT_18s0001g07360.t01 | Wine grape | cytosol | 18.69 | 37.5 |
| VIT_07s0005g01350.t01 | Wine grape | cytosol | 15.73 | 37.06 |
| VIT_14s0060g01300.t01 | Wine grape | cytosol | 18.4 | 36.47 |
| VIT_01s0011g03690.t01 | Wine grape | cytosol | 16.32 | 33.54 |
| VIT_01s0011g03680.t01 | Wine grape | cytosol | 16.32 | 32.35 |
| VIT_08s0032g00590.t01 | Wine grape | cytosol, plastid | 12.17 | 31.78 |
| VIT_14s0060g01320.t01 | Wine grape | cytosol | 16.91 | 28.08 |
| VIT_14s0066g01130.t01 | Wine grape | cytosol | 11.87 | 22.86 |
Protein Annotations
| EntrezGene:100260568 | wikigene:100260568 | EntrezGene:100265784 | wikigene:100265784 | Gene3D:3.40.50.620 | MapMan:35.2 |
| ProteinID:CCB59954 | ProteinID:CCB59954.1 | UniProt:F6HZ39 | EMBL:FN596502 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | EntrezGene:LOC100260568 | wikigene:LOC100260568 | EntrezGene:LOC100265784 | wikigene:LOC100265784 | PFAM:PF00582 |
| PRINTS:PR01438 | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF16 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF52402 | UniParc:UPI000210A51E |
| InterPro:Universal_stress_UspA | InterPro:UspA | ArrayExpress:VIT_07s0005g00290 | EnsemblPlantsGene:VIT_07s0005g00290 | EnsemblPlants:VIT_07s0005g00290.t01 | RefSeq:XP_002265489 |
| RefSeq:XP_002265489.1 | RefSeq:XP_002265742 | RefSeq:XP_002265742.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:+:3058848..3067235
Molecular Weight (calculated)
36035.7 Da
IEP (calculated)
7.898
GRAVY (calculated)
0.131
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEEKSVMV VGVDDSEHSF YALQWTLDHF FAPFPGTAPF KLVIVHAKPS PTTAIGLAGP GAADVLPYVE ADLKKIAGRV VGKAHEICAS KSVTDVILEV
101: VEGDARNVMC EAVEKHHASI LVVGSHGYGA IKRAVLGSVS DYCAHHAHCT VMIVKKPKIK GKSHFSLTRI LSKTSPMATA EKSVMVVGID HSEHSLYAFE
201: WTLDHFFAPF PGTAPFKLVI VHAKPSPATA IGLGGPGAID VLPYVEADLK KTADRVVEKA REICSSKSVT DVTVEVVEGD ARNVMCEAVE KHHASILVVG
301: SHGYGAIKRA VLGSVSDYCA HHAHCTVMIV KKPKTKH
101: VEGDARNVMC EAVEKHHASI LVVGSHGYGA IKRAVLGSVS DYCAHHAHCT VMIVKKPKIK GKSHFSLTRI LSKTSPMATA EKSVMVVGID HSEHSLYAFE
201: WTLDHFFAPF PGTAPFKLVI VHAKPSPATA IGLGGPGAID VLPYVEADLK KTADRVVEKA REICSSKSVT DVTVEVVEGD ARNVMCEAVE KHHASILVVG
301: SHGYGAIKRA VLGSVSDYCA HHAHCTVMIV KKPKTKH
001: MATGDGKSVM VVGVDDSEQS TYALEWTLDR FFAPYAPNYP FKLFIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAAK VVEKAKAICQ SRSVHGAVIE
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV
Arabidopsis Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82240]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.