CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 1
plastid 1
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG96437
KRH31878
KRH33079
KRH71566

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47710.1	KRH33079	AT2G41760.1	21798944
AT2G47710.1	KRG96437	AT2G47710.1	21798944
AT2G47710.1	KRH31878	AT2G47710.1	21798944
AT2G47710.1	KRH71566	AT2G47710.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71566	Soybean	cytosol	92.68	96.2
CDY27474	Canola	cytosol	30.49	78.12
GSMUA_Achr5P00180_001	Banana	cytosol	64.02	68.18
KRG96437	Soybean	cytosol	67.68	68.1
CDY53014	Canola	cytosol	67.07	67.9
Bra004435.1-P	Field mustard	cytosol	65.85	66.67
CDX80128	Canola	cytosol	65.85	66.67
GSMUA_Achr6P20400_001	Banana	cytosol	62.2	66.23
GSMUA_Achr8P06640_001	Banana	cytosol	62.8	64.38
PGSC0003DMT400061758	Potato	cytosol	61.59	64.33
Solyc06g084540.2.1	Tomato	cytosol	60.98	63.69
Bra000458.1-P	Field mustard	cytosol	62.8	63.58
CDY55534	Canola	cytosol	62.8	63.58
CDX95730	Canola	cytosol	62.8	63.58
CDX83322	Canola	cytosol	62.8	63.58
Bra021440.1-P	Field mustard	cytosol	62.8	63.58
AT2G47710.1	Thale cress	cytosol	62.2	62.96
PGSC0003DMT400037920	Potato	cytosol	57.93	59.01
Solyc06g009050.2.1	Tomato	cytosol, nucleus	57.32	58.39
TraesCS5B01G097600.1	Wheat	cytosol	59.15	57.4
Os12t0552500-01	Rice	cytosol, extracellular, plasma membrane, plastid	59.15	57.4
KRH22975	Soybean	cytosol, peroxisome, plastid	57.32	57.32
Zm00001d023830_P001	Maize	cytosol, extracellular, mitochondrion	59.76	57.31
TraesCS5D01G104200.1	Wheat	cytosol	58.54	56.8
TraesCS5A01G092000.1	Wheat	cytosol	58.54	55.81
EES17172	Sorghum	cytosol	59.76	55.68
Os12t0552400-01	Rice	cytosol	54.27	55.62
HORVU5Hr1G024160.3	Barley	cytosol	58.54	54.86
Zm00001d041638_P001	Maize	cytosol	55.49	51.7
OQU79284	Sorghum	mitochondrion	54.27	47.85
TraesCS5D01G104300.1	Wheat	cytosol	55.49	45.27
TraesCS5B01G097500.1	Wheat	cytosol	55.49	45.27
TraesCS5A01G092100.1	Wheat	cytosol	55.49	45.27
HORVU5Hr1G024170.1	Barley	cytosol	54.88	44.55
KRH33831	Soybean	endoplasmic reticulum	41.46	41.98
KRH69227	Soybean	cytosol	34.15	36.13
KRG96520	Soybean	cytosol	34.15	35.67
KRH68444	Soybean	cytosol	38.41	35.59
KRH31806	Soybean	cytosol	34.76	34.97
KRG96728	Soybean	cytosol	37.2	34.46
VIT_07s0005g00290.t01	Wine grape	cytosol	66.46	32.34
KRH71765	Soybean	endoplasmic reticulum	36.59	31.41
KRH16835	Soybean	cytosol, plastid	33.54	30.73
KRG93269	Soybean	cytosol, nucleus	24.39	22.86
KRH56590	Soybean	cytosol, nucleus	23.78	22.29
KRH72447	Soybean	cytosol	23.17	22.22

Protein Annotations

EMBL:ACUP02006088	EnsemblPlants:KRH31878	EnsemblPlantsGene:GLYMA_10G018700	EntrezGene:100527357	Gene3D:3.40.50.620	GO:GO:0006950
GO:GO:0008150	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964
PANTHER:PTHR31964:SF106	PFAM:PF00582	PRINTS:PR01438	ProteinID:KRH31878	ProteinID:KRH31878.1	SUPFAM:SSF52402
UniParc:UPI00023C9709	UniProt:I1L7V6	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:1622510..1625358

Molecular Weight (calculated)

17590.2 Da

IEP (calculated)

7.999

GRAVY (calculated)

0.179

Length

164 amino acids

Sequence
(BLAST)

001: MAASSSSSEK QVVLIGIDDS EQSTYALNWA LDHFFPSPIF KLVLIHSRPT ATSAVGFAGP VYAGAAEILP IVDSDLRKIA ARVLETAKQL CFNKSVNDVT
101: AEVVEGDPRN VLCDAVDKYR AAILVVGSHG YGAIKRAVLG SVSDYCAHHA HCTVMIVKKP KIKH

Best Arabidopsis Sequence Match ( AT2G47710.1 )
(BLAST)

001: MATGDGKSVM VVGVDDSEQS TYALEWTLDR FFAPYAPNYP FKLFIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAAK VVEKAKAICQ SRSVHGAVIE
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82240]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.