Factsheet for Bra021440.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000239.1-P
Bra000458.1-P
Bra003338.1-P
Bra004435.1-P
Bra007393.1-P
Bra021440.1-P
Bra029936.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47710.1	Bra000239.1-P	AT2G41760.1	21798944
AT2G47710.1	Bra000458.1-P	AT2G47710.1	21798944
AT2G47710.1	Bra004435.1-P	AT2G47710.1	21798944
AT2G47710.1	Bra021440.1-P	AT2G47710.1	21798944
AT2G47710.1	Bra029936.1-P	AT3G49160.1	21798944
AT2G47710.1	Bra003338.1-P	AT3G58450.1	21798944
AT2G47710.1	Bra007393.1-P	AT3G58450.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27474	Canola	cytosol	39.51	100.0
CDY55534	Canola	cytosol	100.0	100.0
Bra000458.1-P	Field mustard	cytosol	88.27	88.27
AT2G47710.1	Thale cress	cytosol	85.19	85.19
Bra004435.1-P	Field mustard	cytosol	84.57	84.57
KRH71566	Soybean	cytosol	63.58	65.19
Solyc06g084540.2.1	Tomato	cytosol	62.96	64.97
PGSC0003DMT400061758	Potato	cytosol	62.96	64.97
GSMUA_Achr5P00180_001	Banana	cytosol	60.49	63.64
KRH31878	Soybean	cytosol	63.58	62.8
Solyc06g009050.2.1	Tomato	cytosol, nucleus	61.73	62.11
PGSC0003DMT400037920	Potato	cytosol	61.73	62.11
GSMUA_Achr6P20400_001	Banana	cytosol	58.64	61.69
KRG96437	Soybean	cytosol	61.73	61.35
TraesCS5B01G097600.1	Wheat	cytosol	61.73	59.17
Zm00001d023830_P001	Maize	cytosol, extracellular, mitochondrion	62.35	59.06
GSMUA_Achr8P06640_001	Banana	cytosol	58.02	58.75
TraesCS5D01G104200.1	Wheat	cytosol	61.11	58.58
Os12t0552500-01	Rice	cytosol, extracellular, plasma membrane, plastid	61.11	58.58
TraesCS5A01G092000.1	Wheat	cytosol	61.11	57.56
EES17172	Sorghum	cytosol	61.73	56.82
Os12t0552400-01	Rice	cytosol	55.56	56.25
HORVU5Hr1G024160.3	Barley	cytosol	59.88	55.43
Bra020665.1-P	Field mustard	cytosol	55.56	53.89
Zm00001d041638_P001	Maize	cytosol	51.23	47.16
TraesCS5D01G104300.1	Wheat	cytosol	58.02	46.77
TraesCS5A01G092100.1	Wheat	cytosol	58.02	46.77
TraesCS5B01G097500.1	Wheat	cytosol	58.02	46.77
HORVU5Hr1G024170.1	Barley	cytosol	57.41	46.04
OQU79284	Sorghum	mitochondrion	51.85	45.16
VIT_07s0005g00290.t01	Wine grape	cytosol	69.75	33.53
Bra019995.1-P	Field mustard	cytosol	35.19	33.33
Bra014401.1-P	Field mustard	cytosol	33.33	33.13
Bra007683.1-P	Field mustard	cytosol	33.33	33.13
Bra030795.1-P	Field mustard	cytosol	27.16	30.99
Bra001427.1-P	Field mustard	cytosol	37.04	30.3
Bra038688.1-P	Field mustard	cytosol	37.04	30.0
Bra034800.1-P	Field mustard	cytosol	36.42	29.5
Bra007393.1-P	Field mustard	cytosol	33.33	28.42
Bra003338.1-P	Field mustard	cytosol	33.95	26.96
Bra008745.1-P	Field mustard	cytosol	27.78	25.71
Bra039110.1-P	Field mustard	cytosol	25.31	23.84
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	29.01	23.74

Protein Annotations

EnsemblPlants:Bra021440.1	EnsemblPlants:Bra021440.1-P	EnsemblPlantsGene:Bra021440	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF106
PFAM:PF00582	PRINTS:PR01438	SUPFAM:SSF52402	UniParc:UPI00015D989E	UniProt:M4DY44	MapMan:35.2

Description

AT2G47710 (E=6e-079) | universal stress protein (USP) family protein

Coordinates

chrA01:+:25207299..25208247

Molecular Weight (calculated)

17503.3 Da

IEP (calculated)

7.108

GRAVY (calculated)

0.140

Length

162 amino acids

Sequence
(BLAST)

001: MATVEEKPLM VVGVDESEQS TYALEWTLDR FFAPYAPNFP FKLLIIHAKP NAVSAVGFAG PGIVEVVPHV DADLKHTAAK VVEKAKGICE SKSVHDATME
101: VFEGDARNIL CEVVDKHHAS LLVVGSHGHG AIKRAVIGSV SDYCAHHAHC SVMIVKKPKI KL

Best Arabidopsis Sequence Match ( AT2G47710.1 )
(BLAST)

001: MATGDGKSVM VVGVDDSEQS TYALEWTLDR FFAPYAPNYP FKLFIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAAK VVEKAKAICQ SRSVHGAVIE
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82240]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.