Factsheet for TraesCS6A01G314000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G293300.1	Wheat	cytosol	92.59	92.59
TraesCS6B01G344000.1	Wheat	cytosol	91.98	91.98
Os02t0760500-01	Rice	cytosol	83.33	83.33
EES07563	Sorghum	cytosol	82.1	82.1
Zm00001d018135_P002	Maize	extracellular	80.86	80.86
GSMUA_Achr6P02230_001	Banana	cytosol	74.07	68.97
VIT_18s0001g07360.t01	Wine grape	cytosol	66.67	64.29
Bra030795.1-P	Field mustard	cytosol	54.94	62.68
CDY31068	Canola	cytosol	65.43	61.99
AT1G09740.1	Thale cress	cytosol	64.81	61.4
CDY20676	Canola	cytosol	64.81	61.4
Solyc04g076200.2.1	Tomato	cytosol, extracellular, plastid	57.41	61.18
Bra019995.1-P	Field mustard	cytosol	63.58	60.23
CDX93484	Canola	cytosol	63.58	60.23
CDX94953	Canola	cytosol	63.58	59.88
KRH16835	Soybean	cytosol, plastid	62.35	56.42
PGSC0003DMT400033576	Potato	cytosol	58.02	54.65
KRH72447	Soybean	cytosol	50.0	47.37
TraesCS2A01G502200.1	Wheat	cytosol, plastid	36.42	35.98
TraesCS4A01G119400.1	Wheat	cytosol	33.33	31.95
TraesCS5A01G389500.1	Wheat	cytosol	35.8	31.69
TraesCS5A01G092000.1	Wheat	cytosol	32.72	30.81
TraesCS5A01G389700.1	Wheat	cytosol	33.33	30.17
TraesCS2A01G111700.1	Wheat	cytosol	29.01	27.81
TraesCS2A01G112500.1	Wheat	cytosol	30.25	27.53
TraesCS6A01G274200.1	Wheat	cytosol	29.63	27.12
TraesCS5A01G151500.2	Wheat	cytosol	31.48	26.56
TraesCS2A01G112400.1	Wheat	cytosol	29.63	26.52
TraesCS5A01G389400.2	Wheat	cytosol	33.33	25.96
TraesCS5A01G092100.1	Wheat	cytosol	30.25	24.38
TraesCS2A01G112600.1	Wheat	cytosol	33.33	23.18

Protein Annotations

EnsemblPlants:TraesCS6A01G314000.1	EnsemblPlantsGene:TraesCS6A01G314000	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	ncoils:Coil	PANTHER:PTHR31964	PANTHER:PTHR31964:SF2
PFAM:PF00582	PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	TIGR:cd00293	MapMan:35.2

Description

No Description!

Coordinates

chr6A:+:550730106..550732129

Molecular Weight (calculated)

15905.5 Da

IEP (calculated)

5.731

GRAVY (calculated)

0.362

Length

162 amino acids

Sequence
(BLAST)

001: MATANLSSVV VAVDGSEESM KALRWALDSL RLCPDGALVV LHVQPPPGIA AGLNPGPIPF GGPSVAEVPA FTQAIESHQR RITDAILEXX XXXXXXXXVE
101: VKTQVVVGDP KEKICEVAAE LKADLLVMGC RAFGPVKRMF LGSVSNYCIN SVGCPVVVIK GT

Best Arabidopsis Sequence Match ( AT1G09740.1 )
(BLAST)

001: MDVSGSLNCV VVAVDGSEVS MEALRWALDN LKLSSSSSDS SFVVLHVQPS PSVAAGVSPG TIPFGGPSGL EVPAFTAAIE QHQKRITDTI LEHASQICAE
101: KSVNVKTQVV IGDPKYKICE AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84TF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.