Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G253700.1 | Wheat | cytosol | 94.98 | 94.98 |
| TraesCS1A01G242200.1 | Wheat | cytosol | 94.14 | 92.98 |
| Os05t0387900-01 | Rice | cytosol | 71.55 | 74.03 |
| EES19457 | Sorghum | cytosol, plastid | 70.29 | 69.14 |
| Zm00001d038071_P002 | Maize | cytosol, plastid | 67.78 | 62.07 |
| KRH33079 | Soybean | cytosol | 49.79 | 54.34 |
| PGSC0003DMT400070177 | Potato | cytosol | 51.05 | 53.28 |
| Solyc04g015760.2.1 | Tomato | cytosol | 50.63 | 53.07 |
| GSMUA_Achr11P... | Banana | cytosol | 53.97 | 51.81 |
| AT2G41760.1 | Thale cress | cytosol | 47.7 | 51.58 |
| VIT_08s0007g08710.t01 | Wine grape | cytosol | 46.44 | 51.15 |
| Bra000239.1-P | Field mustard | cytosol | 45.19 | 50.47 |
| CDY22539 | Canola | cytosol | 47.7 | 49.57 |
| CDY35400 | Canola | cytosol | 48.12 | 48.73 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G242100.1 | EnsemblPlantsGene:TraesCS1D01G242100 | Gene3D:3.10.620.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| GO:GO:0016811 | InterPro:IPR037132 | InterPro:N_Gln_amidohydro_ab_roll_sf | InterPro:Prot_N_Gln_amidohydro_ab_roll | PANTHER:PTHR13035 | PFAM:PF09764 |
| SEG:seg | MapMan:19.2.1.2.1.3 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:332575426..332578440
Molecular Weight (calculated)
26663.4 Da
IEP (calculated)
4.477
GRAVY (calculated)
-0.227
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDGAAAGV DPSPSSPPIH PAAPDNPPID AASFTHTPYY CEENVHLLCK ELIRAGLADP AGNDLYAVFV SNEEKKIPLW YQKASRTNDG FVLWDYHVIC
101: IQSRRNKGDV LDLVWDLDSS LPFPCPFLQY IADAIQPLAF GDSIYGRLFR VVHGPLFLRS FASDRSHMKD PMGNWIELPP KYEPIVAEDG NTNNLNEYIA
201: VSTNDVGDLE SMVNDVYRNK HGVVINETLL PVFFSRLPE
101: IQSRRNKGDV LDLVWDLDSS LPFPCPFLQY IADAIQPLAF GDSIYGRLFR VVHGPLFLRS FASDRSHMKD PMGNWIELPP KYEPIVAEDG NTNNLNEYIA
201: VSTNDVGDLE SMVNDVYRNK HGVVINETLL PVFFSRLPE
001: MSGVTSEPIA MDATRFQHTP YYCEENVYLL CKTLCENGVA EATCSDLFVV FISNEKKQVP LWHQKASTRA DGVVLWDYHV ICVQRKKESD SEPLVWDLDS
101: TLPFPSPLAS YVTETIQPSF QLFAEYQRFF RIVHAPLFFK HFASDRRHMK EPDGSWTAQP PPYEPIVAQD GILHNLSEYI AMSGADTLSS LDPETVTAAI
201: SQKLGVVVSH TQLQDLFTKL P
101: TLPFPSPLAS YVTETIQPSF QLFAEYQRFF RIVHAPLFFK HFASDRRHMK EPDGSWTAQP PPYEPIVAQD GILHNLSEYI AMSGADTLSS LDPETVTAAI
201: SQKLGVVVSH TQLQDLFTKL P
Arabidopsis Description
Protein N-terminal glutamine amidohydrolase [Source:UniProtKB/Swiss-Prot;Acc:O22944]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.