Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d021236_P004 | |
| Zm00001d026088_P002 | |
| Zm00001d040090_P002 | |
| Zm00001d040091_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19457 | Sorghum | cytosol, plastid | 84.29 | 90.53 |
| Os05t0387900-01 | Rice | cytosol | 63.22 | 71.43 |
| TraesCS1A01G242200.1 | Wheat | cytosol | 64.37 | 69.42 |
| TraesCS1B01G253700.1 | Wheat | cytosol | 63.22 | 69.04 |
| TraesCS1D01G242100.1 | Wheat | cytosol | 62.07 | 67.78 |
| KRH33079 | Soybean | cytosol | 45.59 | 54.34 |
| GSMUA_Achr11P... | Banana | cytosol | 50.96 | 53.41 |
| VIT_08s0007g08710.t01 | Wine grape | cytosol | 43.68 | 52.53 |
| PGSC0003DMT400070177 | Potato | cytosol | 44.44 | 50.66 |
| AT2G41760.1 | Thale cress | cytosol | 42.53 | 50.23 |
| Solyc04g015760.2.1 | Tomato | cytosol | 43.68 | 50.0 |
| Bra000239.1-P | Field mustard | cytosol | 39.85 | 48.6 |
| CDY22539 | Canola | cytosol | 42.53 | 48.26 |
| CDY35400 | Canola | cytosol | 42.91 | 47.46 |
Protein Annotations
| EnsemblPlants:Zm00001d038071_P002 | EnsemblPlants:Zm00001d038071_T002 | EnsemblPlantsGene:Zm00001d038071 | EntrezGene:103630307 | Gene3D:3.10.620.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016787 | GO:GO:0016811 | InterPro:IPR037132 | InterPro:N_Gln_amidohydro_ab_roll_sf | InterPro:Prot_N_Gln_amidohydro_ab_roll |
| PANTHER:PTHR13035 | PFAM:PF09764 | ProteinID:AQK85554.1 | SEG:seg | UniParc:UPI000843E944 | UniProt:A0A1D6M2Z5 |
| MapMan:19.2.1.2.1.3 | : | : | : | : | : |
Description
Protein N-terminal glutamine amidohydrolase
Coordinates
chr6:+:146905188..146911103
Molecular Weight (calculated)
29394.0 Da
IEP (calculated)
4.954
GRAVY (calculated)
-0.149
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGRAAAVG GDPSPIAAPS NPPALSSRPV DVSSFTHTPC YCEENVYMLC NELIRTGVAD PAGTDLYVVF ISNEEKKVPL WHQKAGHSDD GFICWDYHVI
101: CIQVKLTKLL CVSWYFLMCI WKSRRSKEVL DFVWDLDSDL PFPSPLIQYV SEAIQPLSFG NSRYARLFRV VHAPVFLQSF ASDRSHMKDP EGNWIQLPPK
201: YEPIVAEDGT TNNLNEYIMM SVGDVADRER MANDVYCNKH GVVLNETIFP EFFAQLPAPH T
101: CIQVKLTKLL CVSWYFLMCI WKSRRSKEVL DFVWDLDSDL PFPSPLIQYV SEAIQPLSFG NSRYARLFRV VHAPVFLQSF ASDRSHMKDP EGNWIQLPPK
201: YEPIVAEDGT TNNLNEYIMM SVGDVADRER MANDVYCNKH GVVLNETIFP EFFAQLPAPH T
001: MSGVTSEPIA MDATRFQHTP YYCEENVYLL CKTLCENGVA EATCSDLFVV FISNEKKQVP LWHQKASTRA DGVVLWDYHV ICVQRKKESD SEPLVWDLDS
101: TLPFPSPLAS YVTETIQPSF QLFAEYQRFF RIVHAPLFFK HFASDRRHMK EPDGSWTAQP PPYEPIVAQD GILHNLSEYI AMSGADTLSS LDPETVTAAI
201: SQKLGVVVSH TQLQDLFTKL P
101: TLPFPSPLAS YVTETIQPSF QLFAEYQRFF RIVHAPLFFK HFASDRRHMK EPDGSWTAQP PPYEPIVAQD GILHNLSEYI AMSGADTLSS LDPETVTAAI
201: SQKLGVVVSH TQLQDLFTKL P
Arabidopsis Description
Protein N-terminal glutamine amidohydrolase [Source:UniProtKB/Swiss-Prot;Acc:O22944]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.