Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- golgi 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr1P18760_001 | |
| GSMUA_Achr3P12410_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G41760.1 | GSMUA_Achr1P18760_001 | AT3G61150.1 | 21798944 |
| AT2G41760.1 | GSMUA_Achr3P12410_001 | AT3G61150.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g08710.t01 | Wine grape | cytosol | 48.59 | 55.76 |
| KRH33079 | Soybean | cytosol | 48.59 | 55.25 |
| TraesCS1B01G253700.1 | Wheat | cytosol | 53.01 | 55.23 |
| Os05t0387900-01 | Rice | cytosol | 51.0 | 54.98 |
| PGSC0003DMT400070177 | Potato | cytosol | 50.2 | 54.59 |
| TraesCS1A01G242200.1 | Wheat | cytosol | 52.61 | 54.13 |
| TraesCS1D01G242100.1 | Wheat | cytosol | 51.81 | 53.97 |
| EES19457 | Sorghum | cytosol, plastid | 52.21 | 53.5 |
| Solyc04g015760.2.1 | Tomato | cytosol | 48.59 | 53.07 |
| AT2G41760.1 | Thale cress | cytosol | 45.78 | 51.58 |
| Zm00001d038071_P002 | Maize | cytosol, plastid | 53.41 | 50.96 |
| CDY22539 | Canola | cytosol | 46.18 | 50.0 |
| Bra000239.1-P | Field mustard | cytosol | 42.57 | 49.53 |
| CDY35400 | Canola | cytosol | 46.59 | 49.15 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P06070_001 | EnsemblPlants:GSMUA_Achr11T06070_001 | EnsemblPlantsGene:GSMUA_Achr11G06070_001 | Gene3D:3.10.620.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0016811 | InterPro:IPR037132 | InterPro:N_Gln_amidohydro_ab_roll_sf | InterPro:Prot_N_Gln_amidohydro_ab_roll | PANTHER:PTHR13035 |
| PFAM:PF09764 | SEG:seg | UniParc:UPI000294F5CE | UniProt:M0RPT7 | MapMan:19.2.1.2.1.3 | : |
Description
Protein N-terminal glutamine amidohydrolase [Source:GMGC_GENE;Acc:GSMUA_Achr11G06070_001]
Coordinates
chr11:-:4641470..4648266
Molecular Weight (calculated)
27972.5 Da
IEP (calculated)
5.067
GRAVY (calculated)
-0.058
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGDGLLEI QGRKRATQTA SVSLPAPVPS PSMVPGASSL DIFSFTHTPN YCEENVYLLC KKLCEVGAAD PMGADLFVVF ISNEEKMVPL WHQKASIRND
101: GLVLWDYHVI CIQSRRGKVF DLVWDLDSSL PFPSPINVYF SEAIQPMYSP NLVNSRLFRV VHAPLFLRCF ASDRSHMKDD LGNWLALPPK YEPITSEDGT
201: KNNLDKYIHM LAADVSANIQ DLVHGVFSNE YGVLVGETMM EWFFSQIHQ
101: GLVLWDYHVI CIQSRRGKVF DLVWDLDSSL PFPSPINVYF SEAIQPMYSP NLVNSRLFRV VHAPLFLRCF ASDRSHMKDD LGNWLALPPK YEPITSEDGT
201: KNNLDKYIHM LAADVSANIQ DLVHGVFSNE YGVLVGETMM EWFFSQIHQ
001: MSGVTSEPIA MDATRFQHTP YYCEENVYLL CKTLCENGVA EATCSDLFVV FISNEKKQVP LWHQKASTRA DGVVLWDYHV ICVQRKKESD SEPLVWDLDS
101: TLPFPSPLAS YVTETIQPSF QLFAEYQRFF RIVHAPLFFK HFASDRRHMK EPDGSWTAQP PPYEPIVAQD GILHNLSEYI AMSGADTLSS LDPETVTAAI
201: SQKLGVVVSH TQLQDLFTKL P
101: TLPFPSPLAS YVTETIQPSF QLFAEYQRFF RIVHAPLFFK HFASDRRHMK EPDGSWTAQP PPYEPIVAQD GILHNLSEYI AMSGADTLSS LDPETVTAAI
201: SQKLGVVVSH TQLQDLFTKL P
Arabidopsis Description
Protein N-terminal glutamine amidohydrolase [Source:UniProtKB/Swiss-Prot;Acc:O22944]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.