Factsheet for GSMUA_Achr1P18760_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P22910_001
GSMUA_Achr3P29310_001
GSMUA_Achr4P03660_001
GSMUA_Achr5P00910_001
GSMUA_Achr9P21560_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G61150.1	GSMUA_Achr1P22910_001	AT1G51355.1	21798944
AT3G61150.1	GSMUA_Achr3P29310_001	AT2G30590.1	21798944
AT3G61150.1	GSMUA_Achr4P03660_001	AT2G30590.1	21798944
AT3G61150.1	GSMUA_Achr9P21560_001	AT2G30590.1	21798944
AT3G61150.1	GSMUA_Achr5P00910_001	AT3G27580.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P12410_001	Banana	nucleus	70.9	72.24
GSMUA_Achr11P...	Banana	nucleus	67.72	68.82
GSMUA_Achr5P10510_001	Banana	nucleus	70.24	66.79
GSMUA_Achr5P20050_001	Banana	nucleus	70.24	66.79
VIT_15s0048g02000.t01	Wine grape	nucleus	71.03	66.21
GSMUA_Achr11P...	Banana	nucleus	67.72	65.98
PGSC0003DMT400071377	Potato	nucleus	71.16	65.53
Solyc01g091630.2.1	Tomato	nucleus	71.03	65.41
GSMUA_AchrUn_...	Banana	nucleus	66.14	65.02
KRH48236	Soybean	nucleus	70.37	64.17
CDX74762	Canola	nucleus	59.92	63.98
CDY18903	Canola	nucleus	59.66	63.97
KRH40539	Soybean	nucleus	69.18	63.78
KRH65144	Soybean	nucleus	70.24	63.52
KRH00641	Soybean	nucleus	68.78	63.26
CDY07201	Canola	nucleus	65.08	62.44
CDY51143	Canola	nucleus	65.08	62.28
Bra037355.1-P	Field mustard	nucleus	65.08	62.28
Os02t0674800-01	Rice	nucleus	66.01	62.06
Zm00001d040090_P002	Maize	nucleus	65.74	61.89
CDX74347	Canola	nucleus	64.81	61.79
CDX67855	Canola	nucleus	63.62	61.67
HORVU6Hr1G065300.3	Barley	nucleus	65.21	61.62
CDY45684	Canola	nucleus	63.62	61.35
CDX91894	Canola	nucleus	64.42	61.34
TraesCS6A01G255800.1	Wheat	nucleus	65.21	61.32
TraesCS6D01G237000.1	Wheat	nucleus	65.21	61.32
Bra003439.1-P	Field mustard	nucleus	63.62	61.27
AT4G00730.1	Thale cress	nucleus	64.95	61.22
EES02604	Sorghum	nucleus	65.87	61.1
TraesCS6B01G269700.1	Wheat	nucleus	64.95	61.07
AT3G61150.1	Thale cress	nucleus	64.15	60.02
Bra004934.1-P	Field mustard	nucleus	62.3	59.92
PGSC0003DMT400019986	Potato	nucleus	64.02	59.83
Zm00001d040091_P001	Maize	nucleus	20.24	58.62
Os04t0569100-01	Rice	nucleus	61.64	57.82
KXG26935	Sorghum	nucleus	57.28	53.99
GSMUA_Achr3P23090_001	Banana	endoplasmic reticulum, plasma membrane	46.69	53.48
TraesCS2D01G398600.1	Wheat	nucleus	53.84	51.91
GSMUA_Achr8P07310_001	Banana	mitochondrion, nucleus	49.21	51.24
TraesCS2B01G419200.1	Wheat	nucleus	53.04	51.08
TraesCS2A01G401200.3	Wheat	nucleus	53.31	50.38
Zm00001d026088_P002	Maize	nucleus	55.03	49.88
HORVU2Hr1G095210.1	Barley	nucleus	51.45	49.87
GSMUA_Achr10P...	Banana	nucleus	46.69	49.37
GSMUA_Achr11P...	Banana	plastid	50.26	48.16
GSMUA_Achr10P...	Banana	nucleus	44.97	47.82
GSMUA_Achr6P05990_001	Banana	nucleus	36.9	46.27
GSMUA_Achr7P11310_001	Banana	nucleus	43.78	44.97
GSMUA_Achr7P00210_001	Banana	nucleus	40.34	44.92
GSMUA_Achr2P15140_001	Banana	nucleus	43.65	44.65
GSMUA_Achr10P...	Banana	nucleus	39.02	43.26
GSMUA_Achr3P15400_001	Banana	nucleus	42.2	42.59
GSMUA_Achr5P14100_001	Banana	nucleus	40.21	40.21
GSMUA_Achr8P27340_001	Banana	nucleus	39.42	39.79
GSMUA_Achr4P19010_001	Banana	nucleus	41.01	38.7

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr1G18760_001	EnsemblPlants:GSMUA_Achr1P18760_001	EnsemblPlants:GSMUA_Achr1T18760_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	UniProt:M0S134	PFAM:PF00046	PFAM:PF01852
ScanProsite:PS00027	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF487	SMART:SM00234
SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom	UniParc:UPI0002948F29	SEG:seg

Description

Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G18760_001]

Coordinates

chr1:-:14012496..14015845

Molecular Weight (calculated)

82517.8 Da

IEP (calculated)

6.101

GRAVY (calculated)

-0.225

Length

756 amino acids

Sequence
(BLAST)

001: MSFGGLSDGR SGALPYGKAA MTTGELSPPE FISQRLPKPS FVSPGLSLGL VKKTDPCIID TSRMAAVGGG SDVDSAKRNK EDENDSRSES DNLEAISGDD
101: TDQVNPRKKK RYHRHTPLQI QELEALFKEC PHPDEKQRLE LSKRLNLETR QVKFWFQNRR TQMKTQIERH ENSILRQEND KLRAENMAIR EAARNPVCNS
201: CGGPAMLADI SMEEQQLRIE NARLKEELDR VCALAGKFLG KSISSLSEPI SPSMRSSVLE LGVGNNGFLG ERSMHLELAL VAMEELVNMA QMEEPLWVPS
301: SDGGTETLNH EQYLRTFRRI SGTGMPPVGY ASEASRQKGV VIINSLALVE TLMDARRWAD MFPCIIAKAT TMEVISGGVG GTRDGALQLM HAELQVLSPL
401: VAVREVYFLR FCKQHAEGVW AVVDVSVDSI RASFSSASCR RLPSGCVVQD MPSGYSKVTW VEHAEYEEGQ VHQLYRPLLR SGLAFGAGRW VATLQRQCEG
501: LAILMSSAIT ARDETETITA SGRRSMLKLA QRMTNAFCAG VCTSSAQEWS KLATENVGDE VRVMTRMSVN EPGEPAGVVL SAATSVWIPE SPKRLFDFLR
601: EASFRSKWDI LSNGAPMYEM AHIAKGQDAG NAVSLLRASA ASSNQTSMLI LQETCTDASG AMVVYAPVDI PAMHLVMSGG DSAYVALLPS GFAILPDRSV
701: EPHQTSGSLG SLLTVGFQIL VNSQPTAKLT MESVETVNGL ISCTVQKIKA ALQCDD

Best Arabidopsis Sequence Match ( AT4G00730.1 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTSI TPGGRKSMLK LAQRMTFNFC SGISAPSVHN WSKLTVGNVD
601: PDVRVMTRKS VDDPGEPPGI VLSAATSVWL PAAPQRLYDF LRNERMRCEW DILSNGGPMQ EMAHITKGQD QGVSLLRSNA MNANQSSMLI LQETCIDASG
701: ALVVYAPVDI PAMHVVMNGG DSSYVALLPS GFAVLPDGGI DGGGSGDGDQ RPVGGGSLLT VAFQILVNNL PTAKLTVESV ETVNNLISCT VQKIRAALQC
801: ES

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.