CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040090_P002	Maize	nucleus	94.23	95.64
Zm00001d040091_P001	Maize	nucleus	28.22	88.12
Os02t0674800-01	Rice	nucleus	85.64	86.82
TraesCS6A01G255800.1	Wheat	nucleus	82.33	83.46
HORVU6Hr1G065300.3	Barley	nucleus	81.84	83.38
TraesCS6B01G269700.1	Wheat	nucleus	82.21	83.33
TraesCS6D01G237000.1	Wheat	nucleus	81.72	82.84
KXG26935	Sorghum	nucleus	64.91	65.96
GSMUA_Achr1P18760_001	Banana	nucleus	61.1	65.87
CDY18903	Canola	nucleus	55.83	64.54
VIT_15s0048g02000.t01	Wine grape	nucleus	64.17	64.49
CDX74762	Canola	nucleus	55.58	63.98
KRH40539	Soybean	nucleus	64.05	63.66
KRH00641	Soybean	nucleus	63.68	63.14
Bra037355.1-P	Field mustard	nucleus	60.49	62.41
CDY51143	Canola	nucleus	60.37	62.28
KRH48236	Soybean	nucleus	63.19	62.12
PGSC0003DMT400071377	Potato	nucleus	62.58	62.12
CDX91894	Canola	nucleus	60.49	62.09
CDX74347	Canola	nucleus	60.37	62.04
AT4G00730.1	Thale cress	nucleus	60.74	61.72
Solyc01g091630.2.1	Tomato	nucleus	62.09	61.63
CDY07201	Canola	nucleus	59.51	61.55
Bra004934.1-P	Field mustard	nucleus	59.02	61.2
KRH65144	Soybean	nucleus	62.45	60.89
CDX67855	Canola	nucleus	58.04	60.64
CDY45684	Canola	nucleus	58.04	60.33
Bra003439.1-P	Field mustard	nucleus	58.04	60.25
PGSC0003DMT400019986	Potato	nucleus	59.14	59.58
GSMUA_Achr3P12410_001	Banana	nucleus	54.23	59.57
AT3G61150.1	Thale cress	nucleus	58.53	59.03
EER99222	Sorghum	nucleus	60.37	56.42
EES11464	Sorghum	nucleus	49.2	50.82
EES13460	Sorghum	mitochondrion, nucleus	47.85	49.94
EES05874	Sorghum	nucleus	42.33	48.8
EES14500	Sorghum	nucleus	48.1	48.16
EER89393	Sorghum	nucleus	39.63	46.14
OQU87592	Sorghum	nucleus	31.66	36.29
EER98409	Sorghum	nucleus	32.39	36.16
KXG38837	Sorghum	nucleus	38.65	35.71
OQU81266	Sorghum	nucleus	32.64	34.59
OQU81174	Sorghum	nucleus	31.17	34.42
EES01587	Sorghum	nucleus	28.47	30.53

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	EntrezGene:8079064	UniProt:C5XEA6	ncoils:Coil	EnsemblPlants:EES02604
ProteinID:EES02604	ProteinID:EES02604.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	PFAM:PF00046
PFAM:PF01852	ScanProsite:PS00027	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF487
SMART:SM00234	SMART:SM00389	EnsemblPlantsGene:SORBI_3003G096300	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom
unigene:Sbi.20121	UniParc:UPI0001A84CBA	RefSeq:XP_002457484.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:8517359..8523922

Molecular Weight (calculated)

86899.3 Da

IEP (calculated)

5.153

GRAVY (calculated)

-0.148

Length

815 amino acids

Sequence
(BLAST)

001: MSFGSLFDGG AGGGGGGGMQ FPFSTGFSSS PALSLGLDNA GGGGMVGRML PGGAGAGAAA DGGGMMMGRD ADAENDSRSG SDHLDAMSAG GAEDEDDAEP
101: GNPRKRKKRY HRHTPQQIQE LEALFKECPH PDEKQRGELS KRLGLDPRQV KFWFQNRRTQ MKTQLERHEN ALLKQENDKL RAENMAIREA MRSPMCGSCG
201: SPAMLGEVSL EEQHLCIENA RLKDELSRVY ALATKFLGKP MSILSAGTML QPNLSLPMPS SSLELAVGGG LRGLGSIPSA ATMPGSMGDF AGGVSSPLGT
301: VITPARTTGS APPPMVGIDR SMLLELAISA MDELVKLAQI DEPLWLPSLN GSPNKELLNF EEYAHSFLPC VGVKPVGYVS EASRESGLVI FDNSLALVET
401: LMDERRWSDM FSCMIAKATV LEEVTSGIAG SRNGGLLLMK AELQVLSPLV PIREVTFLRF CKQLAEGAWA VVDVSIDGLV RDQNSATASN AGNIRCRRLP
501: SGCVMQDTPN GYCKVTWVEH TEYDEASVHQ LYRPLLRSGL AFGARRWLAM LQRQCECLAI LMSPDTVSAN DSSVITQEGK RSMLKLARRM TENFCAGVSA
601: SSAREWSKLD GAAGSIGEDV RVMARKSVDE PGEPPGVVLS AATSVWVPVA PEKLFNFLRD EQLRAEWDIL SNGGPMQEMA NIAKGQEHGN SVSLLRASAM
701: SANQSSMLIL QETCTDASGS MVVYAPVDIP AMQLVMNGGD STYVALLPSG FAILPDGPSG VGAEHKTGGS LLTVAFQILV NSQPTAKLTV ESVETVNNLI
801: SCTIKKIKTA LQCDA

Best Arabidopsis Sequence Match ( AT4G00730.1 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTSI TPGGRKSMLK LAQRMTFNFC SGISAPSVHN WSKLTVGNVD
601: PDVRVMTRKS VDDPGEPPGI VLSAATSVWL PAAPQRLYDF LRNERMRCEW DILSNGGPMQ EMAHITKGQD QGVSLLRSNA MNANQSSMLI LQETCIDASG
701: ALVVYAPVDI PAMHVVMNGG DSSYVALLPS GFAVLPDGGI DGGGSGDGDQ RPVGGGSLLT VAFQILVNNL PTAKLTVESV ETVNNLISCT VQKIRAALQC
801: ES

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.