Factsheet for HORVU6Hr1G065300.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G269700.1	Wheat	nucleus	98.75	98.26
TraesCS6A01G255800.1	Wheat	nucleus	98.62	98.13
TraesCS6D01G237000.1	Wheat	nucleus	97.88	97.39
Os02t0674800-01	Rice	nucleus	86.75	86.32
Zm00001d040090_P002	Maize	nucleus	82.25	81.94
EES02604	Sorghum	nucleus	83.38	81.84
Zm00001d040091_P001	Maize	nucleus	24.75	75.86
GSMUA_Achr1P18760_001	Banana	nucleus	61.62	65.21
CDY18903	Canola	nucleus	57.0	64.68
CDX74762	Canola	nucleus	57.0	64.41
KRH40539	Soybean	nucleus	65.38	63.78
VIT_15s0048g02000.t01	Wine grape	nucleus	64.62	63.75
KRH00641	Soybean	nucleus	65.12	63.38
KRH48236	Soybean	nucleus	64.0	61.76
PGSC0003DMT400071377	Potato	nucleus	63.0	61.39
Bra004934.1-P	Field mustard	nucleus	60.25	61.32
Solyc01g091630.2.1	Tomato	nucleus	62.88	61.27
HORVU0Hr1G013510.1	Barley	cytosol	10.62	61.15
CDY51143	Canola	nucleus	60.25	61.01
Bra037355.1-P	Field mustard	nucleus	60.25	61.01
AT4G00730.1	Thale cress	nucleus	60.75	60.6
CDX74347	Canola	nucleus	60.0	60.53
KRH65144	Soybean	nucleus	63.12	60.41
CDY07201	Canola	nucleus	59.5	60.41
CDX91894	Canola	nucleus	59.88	60.33
CDX67855	Canola	nucleus	58.62	60.13
CDY45684	Canola	nucleus	58.75	59.95
Bra003439.1-P	Field mustard	nucleus	58.62	59.75
PGSC0003DMT400019986	Potato	nucleus	59.88	59.21
AT3G61150.1	Thale cress	nucleus	58.88	58.29
GSMUA_Achr3P12410_001	Banana	nucleus	53.38	57.55
HORVU5Hr1G080700.2	Barley	nucleus	59.75	56.04
HORVU2Hr1G095210.1	Barley	nucleus	54.38	55.77
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	8.38	51.94
HORVU2Hr1G106970.2	Barley	nucleus, plastid	47.62	49.03
HORVU7Hr1G073440.1	Barley	nucleus	48.0	48.24
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	46.38	46.61
HORVU6Hr1G079410.6	Barley	nucleus	40.5	44.69
HORVU0Hr1G006920.1	Barley	nucleus	5.5	44.44
HORVU7Hr1G103020.1	Barley	nucleus	11.0	43.78
HORVU7Hr1G035250.1	Barley	nucleus	7.62	40.94
HORVU4Hr1G062510.2	Barley	cytosol	14.12	40.79
HORVU7Hr1G036950.2	Barley	cytosol	9.12	39.89
HORVU3Hr1G108430.1	Barley	cytosol	15.25	36.64
HORVU3Hr1G073290.1	Barley	nucleus	29.25	35.67
HORVU7Hr1G035230.2	Barley	nucleus	32.5	34.95
HORVU1Hr1G050620.2	Barley	nucleus	38.12	34.46
HORVU1Hr1G005430.1	Barley	nucleus	9.38	34.4
HORVU5Hr1G083940.3	Barley	nucleus	30.75	31.7
HORVU3Hr1G077690.1	Barley	nucleus	26.5	31.59
HORVU3Hr1G022070.1	Barley	nucleus	7.12	30.16
HORVU3Hr1G022160.1	Barley	cytosol	3.12	22.73
HORVU3Hr1G022170.1	Barley	cytosol	3.25	21.85

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	UniProt:A0A287UGI6	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU6Hr1G065300	EnsemblPlants:HORVU6Hr1G065300.3	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	PFAM:PF00046	PFAM:PF01852	ScanProsite:PS00027
PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF487	SMART:SM00234	SMART:SM00389
SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom	UniParc:UPI000B46857C	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:447371890..447377568

Molecular Weight (calculated)

86239.2 Da

IEP (calculated)

5.471

GRAVY (calculated)

-0.197

Length

800 amino acids

Sequence
(BLAST)

001: MSFGGLFDGG GGGGMQFPYA GAFSSSPALS LGLDNAGGRD GGIGGRMFPD GAMARDAEAQ NDSRSGSDHL DAISGVGDDD DDAEPSGSNP RKRKKRYHRH
101: TPQQIQELEA LFKECPHPDE KQRGELSKRL SLDARQVKFW FQNRRTQMKT QLERHENALL KQENEKLRTE NLTIREAMRT PMCGGCGSPA MLGEVSLEEQ
201: HLRIENARLK DELNRVCTLA TKFLGKPVSL LSPLQLQPHL SMPLPNSSLE LAVGGIGGIG SMQSSMHGMM SEYAGGASSS MGTVITPARA TGSALASMVD
301: IDRSVFLELA ISAMDELVKM AQTDDPFWVT GLPGFPDKES LNFEEYLHSS QHCIGMKPAG FVSEASRESG LVIIDNSLAL VETLMDERRW SDMFSCMIAK
401: ATILEEVSNG IGGTRNGALL LMKAELQVLS PLVPIREVIF LRFCKQLAEG AWAVVDVSID GLLSNQNSAT TSAGANLKCR RLPSGCVMQD TPNGYCKVTW
501: VEHTEYDEAS VHQFYRPLLR SGLAFGASRW LATLQRQCEC LAILMSSATA SPNEQTAISQ EGRRSMLKLA RRMTENFCAG VSASSAREWS KLDGATGSIG
601: EDVRVMARKS VSEPGEPPGV VLSAATSVWV PIAPEKLFDF LRDEQLRAEW DILSNGGPMQ EMARIAKGHQ NGNSVSLLRA SAMSANQSSM LILQETCTDA
701: SGSIVVYAPV DIPAMQLVMN GGDSTYVALL PSGFAILPDG PSIGSEHKTG GSLLTVAFQI LVNSQPTAKL TVESVETVNN LISCTIKKIK TALQCATPEC

Best Arabidopsis Sequence Match ( AT4G00730.1 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTSI TPGGRKSMLK LAQRMTFNFC SGISAPSVHN WSKLTVGNVD
601: PDVRVMTRKS VDDPGEPPGI VLSAATSVWL PAAPQRLYDF LRNERMRCEW DILSNGGPMQ EMAHITKGQD QGVSLLRSNA MNANQSSMLI LQETCIDASG
701: ALVVYAPVDI PAMHVVMNGG DSSYVALLPS GFAVLPDGGI DGGGSGDGDQ RPVGGGSLLT VAFQILVNNL PTAKLTVESV ETVNNLISCT VQKIRAALQC
801: ES

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.