Factsheet for HORVU7Hr1G035230.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0208100-00	Rice	nucleus	15.46	89.15
TraesCS7D01G168700.1	Wheat	nucleus	76.08	77.32
TraesCS7B01G072700.1	Wheat	nucleus	75.81	77.26
TraesCS7A01G167900.1	Wheat	nucleus	75.27	77.24
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	12.1	69.77
Zm00001d044973_P001	Maize	nucleus	57.53	62.12
Zm00001d037140_P004	Maize	nucleus	56.99	61.72
EER89393	Sorghum	nucleus	57.66	61.29
HORVU7Hr1G103020.1	Barley	nucleus	16.53	61.19
HORVU6Hr1G079410.6	Barley	nucleus	55.78	57.24
GSMUA_Achr6P05990_001	Banana	nucleus	40.05	49.42
GSMUA_Achr10P...	Banana	nucleus	45.43	47.54
HORVU7Hr1G035250.1	Barley	nucleus	9.27	46.31
GSMUA_Achr2P15140_001	Banana	nucleus	45.83	46.14
GSMUA_Achr7P11310_001	Banana	nucleus	44.35	44.84
HORVU0Hr1G006920.1	Barley	nucleus	5.91	44.44
Os06t0207966-00	Rice	plastid	15.32	43.35
GSMUA_Achr10P...	Banana	nucleus	39.38	42.96
HORVU7Hr1G073440.1	Barley	nucleus	37.1	34.67
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	36.42	34.05
HORVU2Hr1G106970.2	Barley	nucleus, plastid	35.35	33.85
HORVU6Hr1G065300.3	Barley	nucleus	34.95	32.5
HORVU3Hr1G073290.1	Barley	nucleus	27.15	30.79
HORVU5Hr1G080700.2	Barley	nucleus	33.6	29.31
HORVU1Hr1G050620.2	Barley	nucleus	34.14	28.7
HORVU2Hr1G095210.1	Barley	nucleus	28.9	27.56
HORVU1Hr1G005430.1	Barley	nucleus	7.53	25.69
HORVU3Hr1G022070.1	Barley	nucleus	6.45	25.4
HORVU7Hr1G036950.2	Barley	cytosol	6.05	24.59
HORVU4Hr1G062510.2	Barley	cytosol	9.01	24.19
HORVU3Hr1G077690.1	Barley	nucleus	21.1	23.4
HORVU5Hr1G083940.3	Barley	nucleus	23.25	22.29
HORVU3Hr1G108430.1	Barley	cytosol	9.01	20.12
HORVU3Hr1G022170.1	Barley	cytosol	2.96	18.49
HORVU3Hr1G022160.1	Barley	cytosol	2.15	14.55
HORVU0Hr1G013510.1	Barley	cytosol	2.42	12.95

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	UniProt:A0A287W0F8	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:HORVU7Hr1G035230	EnsemblPlants:HORVU7Hr1G035230.2	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:IPR002913	PFAM:PF00046	PFAM:PF01852	ScanProsite:PS00027	PFscan:PS50071
PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF490	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689
SUPFAM:SSF55961	InterPro:START_lipid-bd_dom	UniParc:UPI000B4802FE	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:+:76645436..76649928

Molecular Weight (calculated)

82623.3 Da

IEP (calculated)

8.342

GRAVY (calculated)

-0.637

Length

744 amino acids

Sequence
(BLAST)

001: MDFGDDQEGG SESNQQQQQN QNQNQRRKRY HRHTPRQIQT LEAMFKECPH PDETQRAALS QDLGLEARQI KFWFQNRRTQ MKAQHERQDN CFLRVENDKI
101: RCENIAMREA LKNVICPTCG GPPVAEDYFD EQKLRMENAR LKQELDRVAG LTAKYLGRPF TQMPQGTPQM SVSSLDLSMG GVPMGGHHQP FGGGGLSLDL
201: DLLSGAGLGL PSSDTPAMHL PAPVTDAERP LMARMATRAM DELIRLTQQG ENVWVKIPGG DGREIIHVET YDSIYSKPGS SNFRAGDIRV EGSRDTVIVC
301: MSPVALVEVF MDASKFMEFF PSIVSHARIT DILVNGINGR SESLVMMYEQ LQFTTPAVPT REFSFLRYCR QIDQGVWAIA DVSADMQREV HYGGPPPRSR
401: RLPSGCLISD MTNGYSRVTW VEHMEIEDKS PIGPLYRDMV QSGAAFGAHR WVASLHRACE RYASSLESPG VMHGETTGVT AEGRRSMMAL SQRMVSSFCG
501: SMTASQQHQW TTMPGADGNE VCVRVAMNQG AGQPNGVVLG AATSVWLPVP ADHVFAFLRD ENTRAQWDVL SKENSVQPVS RVPNGPDPGN CITLLRVMSP
601: EPEPEPPRRP GHHAGAAGEL HGRVGGLHGG VLAHRHPGGQ HDDERRRPIG HPAAALGVRH LARGRGRRVH QRRRPDGGGV HRQRRLPDPH QQPAVVQAQR
701: RVHRHRQQPR QHHNPEHQGL PQLRVAAMGH EAGAHPTHPP INPS

Best Arabidopsis Sequence Match ( AT1G17920.1 )
(BLAST)

001: MEFLGDSQNH DSSETEKKNK KKKRFHRHTP HQIQRLESTF NECQHPDEKQ RNQLSRELGL APRQIKFWFQ NRRTQKKAQH ERADNCALKE ENDKIRCENI
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA

Arabidopsis Description

HDG12Uncharacterized protein At1g17920 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.