Factsheet for HORVU7Hr1G073440.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G208600.1	Wheat	nucleus	98.37	98.12
TraesCS7A01G308400.1	Wheat	nucleus	97.99	97.99
TraesCS7D01G305200.1	Wheat	nucleus	97.61	97.61
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	97.49	97.49
Os08t0136100-01	Rice	nucleus	82.41	83.57
GSMUA_Achr3P23090_001	Banana	endoplasmic reticulum, plasma membrane	61.56	74.24
Zm00001d024701_P001	Maize	nucleus	74.12	74.03
GSMUA_Achr8P07310_001	Banana	mitochondrion, nucleus	66.83	73.28
EES14500	Sorghum	nucleus	74.5	72.85
HORVU2Hr1G106970.2	Barley	nucleus, plastid	67.84	69.5
GSMUA_Achr10P...	Banana	nucleus	60.05	66.85
GSMUA_Achr11P...	Banana	plastid	65.58	66.16
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	9.05	55.81
HORVU0Hr1G013510.1	Barley	cytosol	8.79	50.36
HORVU6Hr1G065300.3	Barley	nucleus	48.24	48.0
HORVU6Hr1G079410.6	Barley	nucleus	42.09	46.21
HORVU7Hr1G103020.1	Barley	nucleus	11.56	45.77
HORVU2Hr1G095210.1	Barley	nucleus	42.71	43.59
HORVU5Hr1G080700.2	Barley	nucleus	46.61	43.49
HORVU0Hr1G006920.1	Barley	nucleus	5.4	43.43
HORVU7Hr1G035250.1	Barley	nucleus	7.41	39.6
HORVU3Hr1G073290.1	Barley	nucleus	31.16	37.8
HORVU7Hr1G036950.2	Barley	cytosol	8.67	37.7
HORVU7Hr1G035230.2	Barley	nucleus	34.67	37.1
HORVU1Hr1G050620.2	Barley	nucleus	41.21	37.06
HORVU4Hr1G062510.2	Barley	cytosol	12.56	36.1
HORVU3Hr1G077690.1	Barley	nucleus	27.26	32.34
HORVU3Hr1G108430.1	Barley	cytosol	13.19	31.53
HORVU1Hr1G005430.1	Barley	nucleus	8.29	30.28
HORVU3Hr1G022070.1	Barley	nucleus	7.16	30.16
HORVU5Hr1G083940.3	Barley	nucleus	28.39	29.12
HORVU3Hr1G022170.1	Barley	cytosol	3.14	21.01
HORVU3Hr1G022160.1	Barley	cytosol	2.76	20.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:HORVU7Hr1G073440	EnsemblPlants:HORVU7Hr1G073440.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:IPR002913	UniProt:M0WKA7	PFAM:PF00046	PFAM:PF01852	ScanProsite:PS00027
PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF349	SMART:SM00234	SMART:SM00389
SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom	UniParc:UPI0002969075	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:-:416150823..416155845

Molecular Weight (calculated)

85558.2 Da

IEP (calculated)

6.430

GRAVY (calculated)

-0.345

Length

796 amino acids

Sequence
(BLAST)

001: MPGGMMIPGR NMIGRSNGAG VAYASSSSSA LSLGQNLMDG MHHHQLPAML QHQMVDHHLL LPQHHHHPHQ QAATSDSDAR GPHGGGNNNS SNNNEELEMS
101: KSGTGSDNNL DGEGGGGGGE DDEQEDPAGQ HPRKKKRYHR HTQHQIQELE AFFKECPHPD DKQRKELSRQ LSLEPLQVKF WFQNKRTQIK TQHERQENTA
201: LRTENDKLRA ENMRYKEALA NASCPNCGGP AAIGEMSFDE HHLRIENARL RDEIDRISAI AAKYVGGKPG SGVAVASAAY PPLPPQSSGR SALDHLGMPG
301: MFGGAEFDKP MVIELAVAAM EELVRMAQLG EPLWVPSLDS EALSEEEYAR AFPRGALGPK SPELRSEASR ETDVVIMNHV SLVEMLMDVR QWSALFSSIV
401: SRAATLDVLS TGVAGNHDGA LQLMSAEFQM PSPLVPTRDT QFLRYCKQHP GGAWAVVDVS LDGLRSAARV GGHFRRRASG CLIQEMPNGY SKVTWVEHVE
501: AGDDAMMHDL YRPLVNSGLA FGARRWTSTL KRQCERLASA MATVPSSGGD VITTAEGRRS MLKLAERMTA SFCGGVTAST THQWTTLSGS GAEDVRVMTR
601: KSVDDPGRPP GIILNAATSF WLPVPPSRVF GFLRDDSTRS EWDILSNGGV VQEMAHIANG SHHGNAVSLL RVNNANSNQS NMLILQECCT DATGSYVVYA
701: PVDVVAMNVV LNGGDPDYVA LLPSGFAILP DGPAGSPDAG GSLLTVAFQI LVDSVPTAKL SLGSVATVNS LIACTVDRIK AAVVVSAGDN AGVAAR

Best Arabidopsis Sequence Match ( AT4G04890.1 )
(BLAST)

001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA

Arabidopsis Description

PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.