Factsheet for HORVU6Hr1G079410.6

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G304300.1	Wheat	nucleus	92.55	97.96
TraesCS6A01G324500.1	Wheat	nucleus	92.41	97.81
TraesCS6B01G354900.3	Wheat	nucleus	93.52	97.27
Zm00001d052133_P001	Maize	nucleus	81.79	84.96
EES05874	Sorghum	nucleus	82.76	84.87
Zm00001d018225_P001	Maize	nucleus	80.97	84.83
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	11.45	64.34
GSMUA_Achr10P...	Banana	nucleus	61.24	62.45
GSMUA_Achr2P15140_001	Banana	nucleus	61.66	60.49
GSMUA_Achr7P11310_001	Banana	nucleus	60.69	59.78
GSMUA_Achr6P05990_001	Banana	nucleus	49.52	59.54
GSMUA_Achr10P...	Banana	nucleus	54.07	57.48
HORVU7Hr1G103020.1	Barley	nucleus	15.86	57.21
HORVU7Hr1G035230.2	Barley	nucleus	57.24	55.78
HORVU7Hr1G035250.1	Barley	nucleus	9.38	45.64
HORVU0Hr1G013510.1	Barley	cytosol	8.69	45.32
HORVU0Hr1G006920.1	Barley	nucleus	6.07	44.44
HORVU7Hr1G073440.1	Barley	nucleus	46.21	42.09
HORVU2Hr1G106970.2	Barley	nucleus, plastid	44.69	41.7
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	44.97	40.95
HORVU6Hr1G065300.3	Barley	nucleus	44.69	40.5
HORVU5Hr1G080700.2	Barley	nucleus	44.28	37.63
HORVU2Hr1G095210.1	Barley	nucleus	40.14	37.31
HORVU1Hr1G050620.2	Barley	nucleus	41.79	34.24
HORVU3Hr1G073290.1	Barley	nucleus	29.52	32.62
HORVU4Hr1G062510.2	Barley	cytosol	11.72	30.69
HORVU3Hr1G077690.1	Barley	nucleus	27.59	29.81
HORVU7Hr1G036950.2	Barley	cytosol	7.03	27.87
HORVU1Hr1G005430.1	Barley	nucleus	8.14	27.06
HORVU3Hr1G022070.1	Barley	nucleus	7.03	26.98
HORVU5Hr1G083940.3	Barley	nucleus	28.55	26.68
HORVU3Hr1G108430.1	Barley	cytosol	10.9	23.72
HORVU3Hr1G022170.1	Barley	cytosol	3.31	20.17
HORVU3Hr1G022160.1	Barley	cytosol	2.48	16.36

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	Gene3D:3.30.530.20	UniProt:A0A287UUU5	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU6Hr1G079410	EnsemblPlants:HORVU6Hr1G079410.6	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	PFAM:PF00046	PFAM:PF01852
ScanProsite:PS00027	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF490	SMART:SM00234
SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI000B46869E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:537722840..537727060

Molecular Weight (calculated)

79719.3 Da

IEP (calculated)

7.122

GRAVY (calculated)

-0.222

Length

725 amino acids

Sequence
(BLAST)

001: MDFGDDLAPG SDAHRRKKRY HRHTPRQIQQ LEAMFKECPH PDENQRMHLS RELGLEPRQI KFWFQNRRTQ MKAQHERADN CFLRAENDKI RCENIAMREA
101: LKNVICPTCG GPHSGADDYF DEHKLRMENA HLKEELDRVS SLTSKYLGRP ITQLPSMQPL SMSSLELSVG GLGSPVALGP ALDLDTLGGS SPFQLPAPVS
201: DMERPMMAEM ATRAMDELIR LAQAGEHLWV KTAGGREVLN VDTYDSIFAK PGSSSFRGPD VHVEGSRDSC LVLTTAIGLV DTFMDSSKWT EFFPTVVTRA
301: RTIDVLVNGM AGRSESLVLV RPDHRSVHFT RVDCFFNLAM SLGAHGRTFY IFFTRVVPQM YEELHVMSPV VPTREFCFLR YCRQIEQGLW AIADVSVDLQ
401: RDARYGAPPA RSRRLPSGCL IADMSNGYSK VTWVEHMETE DKTPINQLYR DLVLSGAAFG AHRWLAALQR ACERHACLVT PPHRDIAGVT LEGKRSMMRL
501: SQRMVGSFCA SLSASQQHRW TTLSGPGAGV DEAAGVRVMV HRSTDPGQPS GVVLSAATSI WLPVPCDRVF AFVRDENTRS QWDVLSHGNP VQEVSRIPNG
601: SHPGNSISLL RGLNASQNSM LILQESCADA SGSLVVYAPI DLPAANVVMS GEDPSAIPLL PSGFTILPDG RASSSGSVVT VAFQILVSSL PSSRLNAESV
701: ATVNSLIGTT VEQIKAALNC GGSSH

Best Arabidopsis Sequence Match ( AT1G73360.1 )
(BLAST)

001: MSFVVGVGGS GSGSGGDGGG SHHHDGSETD RKKKRYHRHT AQQIQRLESS FKECPHPDEK QRNQLSRELG LAPRQIKFWF QNRRTQLKAQ HERADNSALK
101: AENDKIRCEN IAIREALKHA ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP LDLSMTSLTG CGPFGHGPSL
201: DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM
301: NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS
401: GCLIQDMPNG YSKVTWVEHI ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG KRSMMRLAQR MISNYCLSVS
501: RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM
601: LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN
701: LIGTTVHQIK TALSGPTAST TA

Arabidopsis Description

HDG11Homeobox-leucine zipper protein HDG11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.