Factsheet for HORVU7Hr1G035250.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G168900.1	Wheat	nucleus	85.91	85.91
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	44.97	51.94
Solyc04g025740.1.1	Tomato	nucleus	34.23	34.46
HORVU7Hr1G103020.1	Barley	nucleus	44.97	33.33
HORVU0Hr1G006920.1	Barley	nucleus	18.79	28.28
HORVU3Hr1G022070.1	Barley	nucleus	27.52	21.69
HORVU1Hr1G005430.1	Barley	nucleus	29.53	20.18
HORVU3Hr1G022170.1	Barley	cytosol	10.07	12.61
HORVU3Hr1G022160.1	Barley	cytosol	8.05	10.91
HORVU6Hr1G079410.6	Barley	nucleus	45.64	9.38
HORVU7Hr1G035230.2	Barley	nucleus	46.31	9.27
HORVU3Hr1G073290.1	Barley	nucleus	35.57	8.08
HORVU6Hr1G065300.3	Barley	nucleus	40.94	7.62
HORVU2Hr1G106970.2	Barley	nucleus, plastid	39.6	7.59
HORVU2Hr1G095210.1	Barley	nucleus	38.93	7.44
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	39.6	7.41
HORVU7Hr1G073440.1	Barley	nucleus	39.6	7.41
HORVU5Hr1G080700.2	Barley	nucleus	41.61	7.27
HORVU1Hr1G050620.2	Barley	nucleus	38.26	6.44
HORVU3Hr1G077690.1	Barley	nucleus	28.86	6.41
HORVU5Hr1G083940.3	Barley	nucleus	30.2	5.8
HORVU3Hr1G108430.1	Barley	cytosol	8.05	3.6
HORVU7Hr1G036950.2	Barley	cytosol	2.01	1.64
HORVU4Hr1G062510.2	Barley	cytosol	0.67	0.36
HORVU0Hr1G013510.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU7Hr1G035250.1	EnsemblPlantsGene:HORVU7Hr1G035250	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	PANTHER:PTHR24326	PANTHER:PTHR24326:SF504	PFAM:PF00046	PFscan:PS50071
SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000B46F516	UniProt:A0A287W0P0	MapMan:15.5.3.3	:

Description

No Description!

Coordinates

chrchr7H:-:76899211..76900343

Molecular Weight (calculated)

17552.5 Da

IEP (calculated)

5.104

GRAVY (calculated)

-1.014

Length

149 amino acids

Sequence
(BLAST)

001: MDLGDHQEGV SDNQQLLEES RKSQRRHTPE QIQKLEESFQ TCAYPDEAQS AQLGRELGLD TKQIRSWFQN HRTQMKVEYE RAENLFLREE NTRILSENMV
101: MREALKTFVC LNPNCTAKHY FDQQEELNKE NARLKAGLLR CATSFQDEL

Best Arabidopsis Sequence Match ( AT1G73360.1 )
(BLAST)

001: MSFVVGVGGS GSGSGGDGGG SHHHDGSETD RKKKRYHRHT AQQIQRLESS FKECPHPDEK QRNQLSRELG LAPRQIKFWF QNRRTQLKAQ HERADNSALK
101: AENDKIRCEN IAIREALKHA ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP LDLSMTSLTG CGPFGHGPSL
201: DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM
301: NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS
401: GCLIQDMPNG YSKVTWVEHI ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG KRSMMRLAQR MISNYCLSVS
501: RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM
601: LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN
701: LIGTTVHQIK TALSGPTAST TA

Arabidopsis Description

HDG11Homeobox-leucine zipper protein HDG11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.