Factsheet for HORVU5Hr1G080700.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G013510.1	Barley	cytosol	16.3	100.0
TraesCS5A01G314400.2	Wheat	nucleus	96.01	96.47
TraesCS5D01G320600.1	Wheat	nucleus	96.01	96.47
TraesCS5B01G315100.2	Wheat	nucleus	95.9	96.24
Os09t0526300-00	Rice	nucleus	14.54	94.66
EER99222	Sorghum	nucleus	81.24	79.47
Zm00001d021236_P004	Maize	nucleus	79.95	75.53
HORVU7Hr1G036950.2	Barley	cytosol	14.89	69.4
VIT_15s0048g02000.t01	Wine grape	nucleus	58.85	61.9
CDY18903	Canola	nucleus	50.53	61.13
KRH40539	Soybean	nucleus	58.62	60.98
CDX74762	Canola	nucleus	50.53	60.88
KRH00641	Soybean	nucleus	58.26	60.46
HORVU6Hr1G065300.3	Barley	nucleus	56.04	59.75
KRH48236	Soybean	nucleus	58.03	59.71
PGSC0003DMT400071377	Potato	nucleus	57.33	59.56
Solyc01g091630.2.1	Tomato	nucleus	57.21	59.44
HORVU4Hr1G062510.2	Barley	cytosol	19.23	59.21
KRH65144	Soybean	nucleus	57.8	58.97
Bra004934.1-P	Field mustard	nucleus	53.81	58.4
CDY51143	Canola	nucleus	54.04	58.35
Bra037355.1-P	Field mustard	nucleus	54.04	58.35
PGSC0003DMT400019986	Potato	nucleus	54.98	57.97
CDY07201	Canola	nucleus	53.46	57.87
AT4G00730.1	Thale cress	nucleus	54.4	57.86
CDX91894	Canola	nucleus	53.58	57.56
CDX74347	Canola	nucleus	52.99	57.0
CDX67855	Canola	nucleus	51.82	56.67
CDY45684	Canola	nucleus	52.05	56.63
Bra003439.1-P	Field mustard	nucleus	51.7	56.18
AT3G61150.1	Thale cress	nucleus	52.17	55.07
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	8.09	53.49
HORVU3Hr1G108430.1	Barley	cytosol	20.28	51.95
HORVU2Hr1G106970.2	Barley	nucleus, plastid	43.02	47.23
HORVU2Hr1G095210.1	Barley	nucleus	42.91	46.92
HORVU7Hr1G073440.1	Barley	nucleus	43.49	46.61
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	42.67	45.73
HORVU0Hr1G006920.1	Barley	nucleus	5.16	44.44
HORVU6Hr1G079410.6	Barley	nucleus	37.63	44.28
HORVU7Hr1G103020.1	Barley	nucleus	10.32	43.78
HORVU7Hr1G035250.1	Barley	nucleus	7.27	41.61
HORVU3Hr1G073290.1	Barley	nucleus	27.67	35.98
HORVU5Hr1G083940.3	Barley	nucleus	31.65	34.79
HORVU1Hr1G005430.1	Barley	nucleus	8.79	34.4
HORVU1Hr1G050620.2	Barley	nucleus	34.94	33.67
HORVU7Hr1G035230.2	Barley	nucleus	29.31	33.6
HORVU3Hr1G077690.1	Barley	nucleus	24.74	31.45
HORVU3Hr1G022070.1	Barley	nucleus	6.68	30.16
HORVU3Hr1G022160.1	Barley	cytosol	2.93	22.73
HORVU3Hr1G022170.1	Barley	cytosol	3.17	22.69

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	UniProt:A0A287RZ25	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G080700	EnsemblPlants:HORVU5Hr1G080700.2	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	PFAM:PF00046	PFAM:PF01852	ScanProsite:PS00027
PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF350	SMART:SM00234	SMART:SM00389
SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom	UniParc:UPI000B460C62	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:562043258..562050913

Molecular Weight (calculated)

90950.2 Da

IEP (calculated)

5.938

GRAVY (calculated)

-0.296

Length

853 amino acids

Sequence
(BLAST)

001: MSFGGMFDGA GSGVFSYDAG GGGAGMHNPG RLLAPPPIPR PGAGGGFASS TGLSLGMANM EGGGQLGDAS RLGGYLGSTG SGGDGDSLGR AREDENDSRS
101: GSDNLDGASG DDLDPDNSNP RKKKKRYHRH TPQQIQELEA VFKECPHPDE KQRMELSRRL NLESRQVKFW FQNRRTQMKT QIERHENALL RQENDKLRTE
201: NMTIREAMRS PTCGNCGGAA VLGEVSLEEQ HLRIENSRLK DELDRVCALA GKFLGRPVSA ISSPLSLPSS LCSGLDLAVG SNNGFMGMGM QSIPDLMGGG
301: SAAMRLPAGM MGGGLDDGLG GEGVSIDRGA LLELGLAAME ELVKVTQVDD PLWQPSLEIG IETLNYDEYR RAFARVLGPS PAGYVSEATR EVGIAIINSV
401: DLVNSLMNEA RWSEMFPCVV ARASTMEIIS SGMGGTRSGS IQLMRAELQV LSPLVPIREV TFLRFCKQHA DGLWAIVDVS VDGVLRPDSG AGGAGPAGYM
501: GCRLLPSGCI VEDMQNGYAK VTWVVHAEYD EAAVHELYRP LLRSGQALGA RRWLASLQRQ CEYHAILCSN PHPNHGDRHE AISPAGRRCM LRLAQRMADN
601: FCAGVCATAA QKWRRLDEWR VEGAGGREQA SGGEDKVRMM ARQSVGAPGE PPGVVLSATT SVRLPGTSPQ RVFDYLRDEQ RRGEWDILAN GEAMQEMDHI
701: AKGQHHGNAV SLLRPNATSG NQNNMLILQE TCTDASGSLV VYAPVDVQSM HVVMGGGDSA YVSLLPSGFA ILPDGHTMQA APLDPSPQGS SPIAHGGGSN
801: NNPGSLVTVA FQILVNNLPT AKLTVESVDT VSNLLSCTIQ KIKSALQASI ISP

Best Arabidopsis Sequence Match ( AT3G61150.1 )
(BLAST)

001: MNFNGFLDDG AGASKLLSDA PYNNHFSFSA VDTMLGSAAI APSQSLPFSS SGLSLGLQTN GEMSRNGEIM ESNVSRKSSR GEDVESRSES DNAEAVSGDD
101: LDTSDRPLKK KKRYHRHTPK QIQDLESVFK ECAHPDEKQR LDLSRRLNLD PRQVKFWFQN RRTQMKTQIE RHENALLRQE NDKLRAENMS VREAMRNPMC
201: GNCGGPAVIG EISMEEQHLR IENSRLKDEL DRVCALTGKF LGRSNGSHHI PDSALVLGVG VGSGGCNVGG GFTLSSPLLP QASPRFEISN GTGSGLVATV
301: NRQQPVSVSD FDQRSRYLDL ALAAMDELVK MAQTREPLWV RSSDSGFEVL NQEEYDTSFS RCVGPKQDGF VSEASKEAGT VIINSLALVE TLMDSERWAE
401: MFPSMVSRTS TTEIISSGMG GRNGALHLMH AELQLLSPLV PVRQVSFLRF CKQHAEGVWA VVDVSIDSIR EGSSSSCRRL PSGCLVQDMA NGYSKVTWIE
501: HTEYDENHIH RLYRPLLRCG LAFGAHRWMA ALQRQCECLT ILMSSTVSTS TNPSPINCNG RKSMLKLAKR MTDNFCGGVC ASSLQKWSKL NVGNVDEDVR
601: IMTRKSVNNP GEPPGIILNA ATSVWMPVSP RRLFDFLGNE RLRSEWDILS NGGPMKEMAH IAKGHDRSNS VSLLRASAIN ANQSSMLILQ ETSIDAAGAV
701: VVYAPVDIPA MQAVMNGGDS AYVALLPSGF AILPNGQAGT QRCAAEERNS IGNGGCMEEG GSLLTVAFQI LVNSLPTAKL TVESVETVNN LISCTVQKIK
801: AALHCDST

Arabidopsis Description

HDG1HDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Q4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.