Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0760800-00 | Rice | nucleus | 49.49 | 36.57 |
| HORVU7Hr1G103010.2 | Barley | cytosol, mitochondrion, nucleus | 34.34 | 26.36 |
| HORVU7Hr1G035250.1 | Barley | nucleus | 28.28 | 18.79 |
| HORVU3Hr1G022070.1 | Barley | nucleus | 34.34 | 17.99 |
| HORVU7Hr1G103020.1 | Barley | nucleus | 34.34 | 16.92 |
| HORVU1Hr1G005430.1 | Barley | nucleus | 33.33 | 15.14 |
| HORVU3Hr1G073290.1 | Barley | nucleus | 84.85 | 12.8 |
| TraesCS3A01G305300.1 | Wheat | nucleus | 83.84 | 10.91 |
| TraesCS3B01G331200.1 | Wheat | nucleus | 81.82 | 10.73 |
| TraesCS3D01G296500.3 | Wheat | nucleus | 81.82 | 10.2 |
| HORVU3Hr1G022160.1 | Barley | cytosol | 10.1 | 9.09 |
| GSMUA_Achr3P15400_001 | Banana | nucleus | 58.59 | 7.74 |
| VIT_09s0002g04340.t01 | Wine grape | nucleus | 57.58 | 7.6 |
| KRH47277 | Soybean | nucleus | 57.58 | 7.59 |
| KRH23432 | Soybean | plastid | 57.58 | 7.48 |
| GSMUA_Achr8P27340_001 | Banana | nucleus | 55.56 | 7.34 |
| Bra003535.1-P | Field mustard | nucleus | 54.55 | 7.2 |
| KRH09884 | Soybean | plastid | 54.55 | 7.19 |
| PGSC0003DMT400006770 | Potato | nucleus | 55.56 | 7.12 |
| Solyc03g120620.2.1 | Tomato | nucleus | 55.56 | 7.1 |
| AT1G79840.2 | Thale cress | nucleus, plastid | 55.56 | 7.09 |
| CDX79408 | Canola | nucleus | 55.56 | 7.05 |
| OQU87592 | Sorghum | nucleus | 50.51 | 7.03 |
| CDX67929 | Canola | nucleus | 55.56 | 7.02 |
| KRH44348 | Soybean | nucleus | 52.53 | 6.95 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 8.08 | 6.72 |
| HORVU6Hr1G079410.6 | Barley | nucleus | 44.44 | 6.07 |
| HORVU7Hr1G035230.2 | Barley | nucleus | 44.44 | 5.91 |
| HORVU2Hr1G106970.2 | Barley | nucleus, plastid | 43.43 | 5.53 |
| HORVU6Hr1G065300.3 | Barley | nucleus | 44.44 | 5.5 |
| HORVU7Hr1G073450.1 | Barley | mitochondrion, nucleus | 43.43 | 5.4 |
| HORVU7Hr1G073440.1 | Barley | nucleus | 43.43 | 5.4 |
| HORVU1Hr1G050620.2 | Barley | nucleus | 47.47 | 5.31 |
| HORVU5Hr1G080700.2 | Barley | nucleus | 44.44 | 5.16 |
| HORVU2Hr1G095210.1 | Barley | nucleus | 37.37 | 4.74 |
| HORVU3Hr1G077690.1 | Barley | nucleus | 31.31 | 4.62 |
| HORVU5Hr1G083940.3 | Barley | nucleus | 31.31 | 3.99 |
| HORVU3Hr1G108430.1 | Barley | cytosol | 12.12 | 3.6 |
| HORVU4Hr1G062510.2 | Barley | cytosol | 1.01 | 0.36 |
| HORVU0Hr1G013510.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU7Hr1G036950.2 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:HORVU0Hr1G006920 | EnsemblPlants:HORVU0Hr1G006920.1 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF00046 | PRINTS:PR00031 | ScanProsite:PS00027 | PFscan:PS50071 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF272 | SMART:SM00389 | SUPFAM:SSF46689 | TMHMM:TMhelix | SEG:seg |
Description
No Description!
Coordinates
chrchrUn:-:40244701..40245370
Molecular Weight (calculated)
11842.0 Da
IEP (calculated)
10.105
GRAVY (calculated)
-1.044
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: XGSGEEEEGH DDGGKRKKRS RKSYHRHTAE QVRVMEAVFK ESPHPDEKQR QQLSKQLGLS PRQVKFWFQN RRTQIKVSFF ITIFFFFFEL HADHCYLHY
001: MKSIDGCQCC SWPCFKLLNS KKLARDRICM SMAVDMSSKQ PTKDFFSSPA LSLSLAGIFR NASSGSTNPE EDFLGRRVVD DEDRTVEMSS ENSGPTRSRS
101: EEDLEGEDHD DEEEEEEDGA AGNKGTNKRK RKKYHRHTTD QIRHMEALFK ETPHPDEKQR QQLSKQLGLA PRQVKFWFQN RRTQIKAIQE RHENSLLKAE
201: LEKLREENKA MRESFSKANS SCPNCGGGPD DLHLENSKLK AELDKLRAAL GRTPYPLQAS CSDDQEHRLG SLDFYTGVFA LEKSRIAEIS NRATLELQKM
301: ATSGEPMWLR SVETGREILN YDEYLKEFPQ AQASSFPGRK TIEASRDAGI VFMDAHKLAQ SFMDVGQWKE TFACLISKAA TVDVIRQGEG PSRIDGAIQL
401: MFGEMQLLTP VVPTREVYFV RSCRQLSPEK WAIVDVSVSV EDSNTEKEAS LLKCRKLPSG CIIEDTSNGH SKVTWVEHLD VSASTVQPLF RSLVNTGLAF
501: GARHWVATLQ LHCERLVFFM ATNVPTKDSL GVTTLAGRKS VLKMAQRMTQ SFYRAIAASS YHQWTKITTK TGQDMRVSSR KNLHDPGEPT GVIVCASSSL
601: WLPVSPALLF DFFRDEARRH EWDALSNGAH VQSIANLSKG QDRGNSVAIQ TVKSREKSIW VLQDSSTNSY ESVVVYAPVD INTTQLVLAG HDPSNIQILP
701: SGFSIIPDGV ESRPLVITST QDDRNSQGGS LLTLALQTLI NPSPAAKLNM ESVESVTNLV SVTLHNIKRS LQIEDC
101: EEDLEGEDHD DEEEEEEDGA AGNKGTNKRK RKKYHRHTTD QIRHMEALFK ETPHPDEKQR QQLSKQLGLA PRQVKFWFQN RRTQIKAIQE RHENSLLKAE
201: LEKLREENKA MRESFSKANS SCPNCGGGPD DLHLENSKLK AELDKLRAAL GRTPYPLQAS CSDDQEHRLG SLDFYTGVFA LEKSRIAEIS NRATLELQKM
301: ATSGEPMWLR SVETGREILN YDEYLKEFPQ AQASSFPGRK TIEASRDAGI VFMDAHKLAQ SFMDVGQWKE TFACLISKAA TVDVIRQGEG PSRIDGAIQL
401: MFGEMQLLTP VVPTREVYFV RSCRQLSPEK WAIVDVSVSV EDSNTEKEAS LLKCRKLPSG CIIEDTSNGH SKVTWVEHLD VSASTVQPLF RSLVNTGLAF
501: GARHWVATLQ LHCERLVFFM ATNVPTKDSL GVTTLAGRKS VLKMAQRMTQ SFYRAIAASS YHQWTKITTK TGQDMRVSSR KNLHDPGEPT GVIVCASSSL
601: WLPVSPALLF DFFRDEARRH EWDALSNGAH VQSIANLSKG QDRGNSVAIQ TVKSREKSIW VLQDSSTNSY ESVVVYAPVD INTTQLVLAG HDPSNIQILP
701: SGFSIIPDGV ESRPLVITST QDDRNSQGGS LLTLALQTLI NPSPAAKLNM ESVESVTNLV SVTLHNIKRS LQIEDC
Arabidopsis Description
GL2HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HQC0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.