Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003535.1-P | Field mustard | nucleus | 94.51 | 98.67 |
| CDX79408 | Canola | nucleus | 97.45 | 97.82 |
| AT1G79840.2 | Thale cress | nucleus, plastid | 89.02 | 89.82 |
| KRH09884 | Soybean | plastid | 62.45 | 65.11 |
| VIT_09s0002g04340.t01 | Wine grape | nucleus | 62.2 | 64.93 |
| KRH23432 | Soybean | plastid | 62.32 | 64.04 |
| KRH44348 | Soybean | nucleus | 59.77 | 62.57 |
| KRH47277 | Soybean | nucleus | 59.9 | 62.45 |
| Os01t0760800-00 | Rice | nucleus | 10.34 | 60.45 |
| Solyc03g120620.2.1 | Tomato | nucleus | 59.0 | 59.61 |
| PGSC0003DMT400006770 | Potato | nucleus | 58.75 | 59.59 |
| GSMUA_Achr3P15400_001 | Banana | nucleus | 54.66 | 57.14 |
| GSMUA_Achr8P27340_001 | Banana | nucleus | 53.51 | 55.94 |
| HORVU0Hr1G006920.1 | Barley | nucleus | 7.02 | 55.56 |
| HORVU3Hr1G073290.1 | Barley | nucleus | 43.3 | 51.68 |
| TraesCS3B01G331200.1 | Wheat | nucleus | 49.17 | 50.99 |
| TraesCS3A01G305300.1 | Wheat | nucleus | 48.91 | 50.33 |
| TraesCS3D01G296500.3 | Wheat | nucleus | 46.1 | 45.47 |
| OQU87592 | Sorghum | nucleus | 40.36 | 44.44 |
| CDY23096 | Canola | nucleus | 7.15 | 42.42 |
| CDX74762 | Canola | nucleus | 38.31 | 42.37 |
| CDY18903 | Canola | nucleus | 37.8 | 41.99 |
| CDX98703 | Canola | nucleus | 36.91 | 41.58 |
| CDX76399 | Canola | nucleus | 37.8 | 41.4 |
| CDX94054 | Canola | nucleus | 36.65 | 41.3 |
| CDY06167 | Canola | nucleus | 37.29 | 40.56 |
| CDY27417 | Canola | nucleus | 36.91 | 40.48 |
| CDX90879 | Canola | nucleus | 36.91 | 40.36 |
| CDY21319 | Canola | nucleus | 36.78 | 40.22 |
| CDY16639 | Canola | nucleus | 37.04 | 39.56 |
| CDX94586 | Canola | nucleus | 36.91 | 39.48 |
| CDY66622 | Canola | nucleus | 36.65 | 39.26 |
| CDY10041 | Canola | nucleus | 37.42 | 39.22 |
| CDX79091 | Canola | nucleus | 37.04 | 38.87 |
| CDY31916 | Canola | nucleus | 33.21 | 38.63 |
| CDY51143 | Canola | nucleus | 38.95 | 38.61 |
| CDY07201 | Canola | nucleus | 38.7 | 38.45 |
| CDX74347 | Canola | nucleus | 38.7 | 38.21 |
| CDX67855 | Canola | nucleus | 37.93 | 38.08 |
| CDX91894 | Canola | nucleus | 38.57 | 38.04 |
| CDY00515 | Canola | nucleus | 32.57 | 37.89 |
| CDY45684 | Canola | nucleus | 37.8 | 37.76 |
| CDY71572 | Canola | nucleus | 18.77 | 37.4 |
| CDX96744 | Canola | nucleus | 32.06 | 37.3 |
| CDY42097 | Canola | nucleus | 24.39 | 36.94 |
| CDY19185 | Canola | nucleus | 32.06 | 36.8 |
| CDX83884 | Canola | nucleus | 32.18 | 36.79 |
| CDY19129 | Canola | nucleus | 33.97 | 36.59 |
| CDY26204 | Canola | nucleus | 29.76 | 36.58 |
| CDY15339 | Canola | nucleus | 34.1 | 36.53 |
| CDY49515 | Canola | plasma membrane | 37.8 | 36.5 |
| CDY26205 | Canola | nucleus | 31.93 | 36.23 |
| CDX68229 | Canola | nucleus | 32.31 | 35.99 |
| CDY46842 | Canola | nucleus | 37.8 | 35.66 |
| CDY11109 | Canola | nucleus | 32.31 | 35.63 |
| CDX96471 | Canola | nucleus | 32.57 | 35.52 |
| CDX72984 | Canola | nucleus | 32.18 | 35.24 |
| CDY48272 | Canola | nucleus | 31.42 | 34.94 |
| CDY12213 | Canola | nucleus | 31.42 | 34.55 |
| CDX89415 | Canola | cytosol, mitochondrion | 7.79 | 34.27 |
| CDY30748 | Canola | endoplasmic reticulum | 24.78 | 33.05 |
| CDY69499 | Canola | cytosol | 12.64 | 32.57 |
| CDX76559 | Canola | nucleus | 30.27 | 32.29 |
| CDY08866 | Canola | nucleus | 30.01 | 31.93 |
| CDY62389 | Canola | cytosol | 19.67 | 31.49 |
| CDY43458 | Canola | nucleus | 32.44 | 31.28 |
| CDX85461 | Canola | cytosol | 28.1 | 31.21 |
| CDY03177 | Canola | nucleus | 32.44 | 30.75 |
| CDX77711 | Canola | nucleus | 31.93 | 30.38 |
| CDY33492 | Canola | nucleus | 30.65 | 30.15 |
| CDY42301 | Canola | nucleus | 26.56 | 30.14 |
| CDY53691 | Canola | nucleus | 27.2 | 30.0 |
| CDY67945 | Canola | nucleus | 26.31 | 29.9 |
| CDY43137 | Canola | nucleus | 26.18 | 29.75 |
| CDY02713 | Canola | nucleus | 27.71 | 29.36 |
| CDY44946 | Canola | nucleus | 23.88 | 28.86 |
| CDY49937 | Canola | nucleus | 25.54 | 28.82 |
| CDY21211 | Canola | nucleus | 25.16 | 28.39 |
| CDY16938 | Canola | nucleus | 23.63 | 28.03 |
| CDY39874 | Canola | plasma membrane | 6.77 | 27.6 |
| CDX89416 | Canola | nucleus | 21.84 | 26.35 |
| CDX94443 | Canola | cytosol | 20.18 | 25.16 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078BVW3 | EnsemblPlants:CDX67929 | ProteinID:CDX67929 |
| ProteinID:CDX67929.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00099137001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF482 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0004EE42A0 | SEG:seg | : | : |
Description
BnaA07g19690D
Coordinates
chrLK031787:+:2944030..2948473
Molecular Weight (calculated)
87995.6 Da
IEP (calculated)
8.010
GRAVY (calculated)
-0.503
Length
783 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNDGKLMFK YLIFNRFWPC FKVIKRGKIK QIKISERMSM AVEMSSKQPT KDFFSSPALS LSLAGIFRNA SSGSTNPEED FLGRRVADDE DRTVEMSSEN
101: SGPTRSRSED NLEGEEDQEE EDGAGNKGNK RKRKKYHRHT TDQIRHMEAL FKETPHPDEK QRQQLSKQLG LAPRQVKFWF QNRRTQIKAI QERHENSLLK
201: AELEKLREEN KAMRESFSKA NSSSCLNCGG GGSPDDLHLE NTKLKAELDK LRAALGRTPY PLQASCSDDQ QRRVGSLELY TGVFALEKSR IVEIANRATL
301: ELQKMATSGE PLWLRSLETG REILNYDEYL KEFPQDQTSS FHGRKTIEAS RDVGIVFMDA HKLAQSFMDV EQWKEMFACL ISKAVTVDVI RQGEGPSRID
401: GAIQLMFGEM QLLTPVVPTR EVYFVRSCRQ LSAEKWAIVD VSVSVEEDNN AEKEGALLRC RKRPSGCIIE DTSNGHSKVT WVEHLDLSAS TVQPLFRSFV
501: NTGLAFGAKH WVATLQLHCE RLVFFMATNV PTKDSLGVTT LAGRKSVLKM AQRMTQSFYR AIAASSYHQW NKITTKTGQD MRVSSRKNLH DPGEPTGVIV
601: CASSSLWLPV SPTLLFDFFR DETRRHEWDA LSNGAHVQSI VSLSKGQDRG NSVSIQTVKS REKSTWVLQD SCTNSYESVV VYAPVDINTT QMVIAGHDPS
701: NIQILPCGFS IIPDGVESRQ LVISSAQEAD RNTQGGSLLT MALQTLVNQS PAAKLNMESV ESVTNLVSVT LHNIKRSLQI EDC
101: SGPTRSRSED NLEGEEDQEE EDGAGNKGNK RKRKKYHRHT TDQIRHMEAL FKETPHPDEK QRQQLSKQLG LAPRQVKFWF QNRRTQIKAI QERHENSLLK
201: AELEKLREEN KAMRESFSKA NSSSCLNCGG GGSPDDLHLE NTKLKAELDK LRAALGRTPY PLQASCSDDQ QRRVGSLELY TGVFALEKSR IVEIANRATL
301: ELQKMATSGE PLWLRSLETG REILNYDEYL KEFPQDQTSS FHGRKTIEAS RDVGIVFMDA HKLAQSFMDV EQWKEMFACL ISKAVTVDVI RQGEGPSRID
401: GAIQLMFGEM QLLTPVVPTR EVYFVRSCRQ LSAEKWAIVD VSVSVEEDNN AEKEGALLRC RKRPSGCIIE DTSNGHSKVT WVEHLDLSAS TVQPLFRSFV
501: NTGLAFGAKH WVATLQLHCE RLVFFMATNV PTKDSLGVTT LAGRKSVLKM AQRMTQSFYR AIAASSYHQW NKITTKTGQD MRVSSRKNLH DPGEPTGVIV
601: CASSSLWLPV SPTLLFDFFR DETRRHEWDA LSNGAHVQSI VSLSKGQDRG NSVSIQTVKS REKSTWVLQD SCTNSYESVV VYAPVDINTT QMVIAGHDPS
701: NIQILPCGFS IIPDGVESRQ LVISSAQEAD RNTQGGSLLT MALQTLVNQS PAAKLNMESV ESVTNLVSVT LHNIKRSLQI EDC
001: MKSIDGCQCC SWPCFKLLNS KKLARDRICM SMAVDMSSKQ PTKDFFSSPA LSLSLAGIFR NASSGSTNPE EDFLGRRVVD DEDRTVEMSS ENSGPTRSRS
101: EEDLEGEDHD DEEEEEEDGA AGNKGTNKRK RKKYHRHTTD QIRHMEALFK ETPHPDEKQR QQLSKQLGLA PRQVKFWFQN RRTQIKAIQE RHENSLLKAE
201: LEKLREENKA MRESFSKANS SCPNCGGGPD DLHLENSKLK AELDKLRAAL GRTPYPLQAS CSDDQEHRLG SLDFYTGVFA LEKSRIAEIS NRATLELQKM
301: ATSGEPMWLR SVETGREILN YDEYLKEFPQ AQASSFPGRK TIEASRDAGI VFMDAHKLAQ SFMDVGQWKE TFACLISKAA TVDVIRQGEG PSRIDGAIQL
401: MFGEMQLLTP VVPTREVYFV RSCRQLSPEK WAIVDVSVSV EDSNTEKEAS LLKCRKLPSG CIIEDTSNGH SKVTWVEHLD VSASTVQPLF RSLVNTGLAF
501: GARHWVATLQ LHCERLVFFM ATNVPTKDSL GVTTLAGRKS VLKMAQRMTQ SFYRAIAASS YHQWTKITTK TGQDMRVSSR KNLHDPGEPT GVIVCASSSL
601: WLPVSPALLF DFFRDEARRH EWDALSNGAH VQSIANLSKG QDRGNSVAIQ TVKSREKSIW VLQDSSTNSY ESVVVYAPVD INTTQLVLAG HDPSNIQILP
701: SGFSIIPDGV ESRPLVITST QDDRNSQGGS LLTLALQTLI NPSPAAKLNM ESVESVTNLV SVTLHNIKRS LQIEDC
101: EEDLEGEDHD DEEEEEEDGA AGNKGTNKRK RKKYHRHTTD QIRHMEALFK ETPHPDEKQR QQLSKQLGLA PRQVKFWFQN RRTQIKAIQE RHENSLLKAE
201: LEKLREENKA MRESFSKANS SCPNCGGGPD DLHLENSKLK AELDKLRAAL GRTPYPLQAS CSDDQEHRLG SLDFYTGVFA LEKSRIAEIS NRATLELQKM
301: ATSGEPMWLR SVETGREILN YDEYLKEFPQ AQASSFPGRK TIEASRDAGI VFMDAHKLAQ SFMDVGQWKE TFACLISKAA TVDVIRQGEG PSRIDGAIQL
401: MFGEMQLLTP VVPTREVYFV RSCRQLSPEK WAIVDVSVSV EDSNTEKEAS LLKCRKLPSG CIIEDTSNGH SKVTWVEHLD VSASTVQPLF RSLVNTGLAF
501: GARHWVATLQ LHCERLVFFM ATNVPTKDSL GVTTLAGRKS VLKMAQRMTQ SFYRAIAASS YHQWTKITTK TGQDMRVSSR KNLHDPGEPT GVIVCASSSL
601: WLPVSPALLF DFFRDEARRH EWDALSNGAH VQSIANLSKG QDRGNSVAIQ TVKSREKSIW VLQDSSTNSY ESVVVYAPVD INTTQLVLAG HDPSNIQILP
701: SGFSIIPDGV ESRPLVITST QDDRNSQGGS LLTLALQTLI NPSPAAKLNM ESVESVTNLV SVTLHNIKRS LQIEDC
Arabidopsis Description
GL2HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HQC0]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.