Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94054 | Canola | nucleus | 99.28 | 99.28 |
| CDY23096 | Canola | nucleus | 18.13 | 95.45 |
| Bra038757.1-P | Field mustard | nucleus | 99.14 | 95.03 |
| CDY27417 | Canola | nucleus | 91.94 | 89.5 |
| CDX76399 | Canola | nucleus | 90.07 | 87.55 |
| AT4G21750.3 | Thale cress | nucleus | 93.53 | 85.3 |
| CDY66622 | Canola | nucleus | 89.5 | 85.09 |
| CDX79091 | Canola | nucleus | 90.5 | 84.32 |
| CDX90879 | Canola | nucleus | 85.9 | 83.38 |
| CDY21319 | Canola | nucleus | 85.61 | 83.1 |
| CDY16639 | Canola | nucleus | 87.34 | 82.81 |
| CDX94586 | Canola | nucleus | 87.19 | 82.79 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 70.22 | 73.94 |
| KRH27601 | Soybean | nucleus | 77.7 | 73.77 |
| KRH77881 | Soybean | nucleus | 76.83 | 73.05 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 61.15 | 72.53 |
| CDY06167 | Canola | nucleus | 70.65 | 68.19 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 70.5 | 67.49 |
| CDY10041 | Canola | nucleus | 70.5 | 65.6 |
| EES11464 | Sorghum | nucleus | 73.38 | 64.64 |
| EES13460 | Sorghum | mitochondrion, nucleus | 72.09 | 64.15 |
| GSMUA_Achr10P... | Banana | nucleus | 65.18 | 63.36 |
| Zm00001d049443_P005 | Maize | nucleus | 72.52 | 63.32 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 70.22 | 62.89 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 69.93 | 62.71 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 69.93 | 62.55 |
| Zm00001d002234_P003 | Maize | nucleus | 70.94 | 62.09 |
| GSMUA_Achr11P... | Banana | plastid | 69.78 | 61.47 |
| Os08t0136100-01 | Rice | nucleus | 68.92 | 61.02 |
| CDY49515 | Canola | plasma membrane | 70.5 | 60.42 |
| Zm00001d026351_P003 | Maize | nucleus | 73.24 | 60.31 |
| Zm00001d000247_P001 | Maize | plasma membrane | 61.44 | 59.39 |
| CDY46842 | Canola | nucleus | 70.36 | 58.92 |
| CDY71572 | Canola | nucleus | 33.09 | 58.52 |
| Zm00001d024701_P001 | Maize | nucleus | 66.91 | 58.34 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 66.47 | 57.89 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 66.19 | 57.79 |
| EES14500 | Sorghum | nucleus | 67.63 | 57.74 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 65.9 | 57.54 |
| CDY18903 | Canola | nucleus | 49.21 | 48.51 |
| CDX74762 | Canola | nucleus | 49.21 | 48.31 |
| CDX96744 | Canola | nucleus | 45.47 | 46.95 |
| CDY12213 | Canola | nucleus | 48.06 | 46.91 |
| CDY48272 | Canola | nucleus | 47.48 | 46.88 |
| CDX74347 | Canola | nucleus | 52.81 | 46.28 |
| CDY51143 | Canola | nucleus | 52.52 | 46.2 |
| CDY07201 | Canola | nucleus | 52.23 | 46.07 |
| CDX91894 | Canola | nucleus | 52.52 | 45.97 |
| CDX67855 | Canola | nucleus | 51.37 | 45.77 |
| CDY45684 | Canola | nucleus | 51.51 | 45.66 |
| CDX83884 | Canola | nucleus | 44.75 | 45.4 |
| CDY19129 | Canola | nucleus | 47.48 | 45.39 |
| CDY30748 | Canola | endoplasmic reticulum | 38.13 | 45.14 |
| CDY26204 | Canola | nucleus | 41.3 | 45.05 |
| CDY15339 | Canola | nucleus | 47.05 | 44.73 |
| CDY42097 | Canola | nucleus | 32.95 | 44.29 |
| CDY19185 | Canola | nucleus | 43.31 | 44.13 |
| CDY31916 | Canola | nucleus | 42.73 | 44.13 |
| CDX68229 | Canola | nucleus | 44.32 | 43.81 |
| CDY26205 | Canola | nucleus | 43.45 | 43.77 |
| CDY00515 | Canola | nucleus | 42.3 | 43.69 |
| CDY11109 | Canola | nucleus | 44.46 | 43.52 |
| CDX72984 | Canola | nucleus | 44.32 | 43.08 |
| CDX96471 | Canola | nucleus | 44.46 | 43.04 |
| CDX89415 | Canola | cytosol, mitochondrion | 10.79 | 42.13 |
| Os08t0187500-01 | Rice | nucleus | 17.55 | 37.42 |
| CDY43458 | Canola | nucleus | 43.31 | 37.07 |
| CDX67929 | Canola | nucleus | 41.58 | 36.91 |
| CDX79408 | Canola | nucleus | 41.3 | 36.79 |
| CDX76559 | Canola | nucleus | 38.85 | 36.78 |
| CDY03177 | Canola | nucleus | 43.31 | 36.44 |
| CDY08866 | Canola | nucleus | 38.42 | 36.28 |
| CDX77711 | Canola | nucleus | 42.3 | 35.72 |
| CDY33492 | Canola | nucleus | 40.43 | 35.3 |
| CDY62389 | Canola | cytosol | 24.75 | 35.17 |
| CDY69499 | Canola | cytosol | 15.25 | 34.87 |
| CDX85461 | Canola | cytosol | 34.68 | 34.18 |
| CDY67945 | Canola | nucleus | 33.09 | 33.38 |
| CDY42301 | Canola | nucleus | 33.09 | 33.33 |
| CDY43137 | Canola | nucleus | 32.66 | 32.95 |
| CDY39874 | Canola | plasma membrane | 9.06 | 32.81 |
| CDY53691 | Canola | nucleus | 33.24 | 32.54 |
| CDY02713 | Canola | nucleus | 34.39 | 32.34 |
| CDY44946 | Canola | nucleus | 30.07 | 32.25 |
| CDY21211 | Canola | nucleus | 31.94 | 31.99 |
| CDY49937 | Canola | nucleus | 31.94 | 31.99 |
| CDY16938 | Canola | nucleus | 29.5 | 31.06 |
| CDX89416 | Canola | nucleus | 28.35 | 30.35 |
| CDX94443 | Canola | cytosol | 26.33 | 29.14 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078EH95 | EnsemblPlants:CDX98703 | ProteinID:CDX98703 | ProteinID:CDX98703.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00106768001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI0004EDEEA9 | : | : | : | : |
Description
BnaA03g44880D
Coordinates
chrLK031906:+:763663..769346
Molecular Weight (calculated)
77147.6 Da
IEP (calculated)
6.245
GRAVY (calculated)
-0.359
Length
695 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQPNMFESH HHMFDMTPKN SDNDLGLTGS REDDFETKSG AEVTMENPLE EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELN
101: LEPLQVKFWF QNKRTQMKAQ HERHENSILK SDNDKLRAEN NRIENARLRE EIDRISAIAA KYVGKPLLTH SSSSFPQLTS SHHIPQTGFL GDMYGTSDIM
201: RSVSIHNDAD KPMIVELAVA AMEELVRMAQ TGDPLWVSSD NAVEILNEEE YFRTFPRGIG PKPLGLRSEA SRESTVVIMN HINLVEILMD VNQWSSVFCG
301: IVSRALTLEV LSTGVAGNYN GALQVMTAEF QVPSPLVPTR ENYFVRYCKQ HSDNTWAVVD VSLDSLRPSP ITRNRRRPSG CLIQELQNGY SKVTWVEHTE
401: VDDRSVHTMY KPLVNTGLAF GAKRWVATLD RQCERLASSM ASNIPTGDLS VITSPEGRKS MLKLAERMVM SFCSGVGASN AHAWTTLATT GSDDVRVMTR
501: KSMDDPGRPP GIVLSAATSF WIPVAPKRVF DFLRDENSRS EWDILSNGGL VQEMAHIANG RDPGNSVSLF RVNSANSGQS NMLILQESCT DASGSYVIYA
601: PVDIMAMNVV LSGGDPDYVA LLPSGFAILP DGSSRVNAMV TSTASNCGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIK CTVERIKAAL ACDGA
101: LEPLQVKFWF QNKRTQMKAQ HERHENSILK SDNDKLRAEN NRIENARLRE EIDRISAIAA KYVGKPLLTH SSSSFPQLTS SHHIPQTGFL GDMYGTSDIM
201: RSVSIHNDAD KPMIVELAVA AMEELVRMAQ TGDPLWVSSD NAVEILNEEE YFRTFPRGIG PKPLGLRSEA SRESTVVIMN HINLVEILMD VNQWSSVFCG
301: IVSRALTLEV LSTGVAGNYN GALQVMTAEF QVPSPLVPTR ENYFVRYCKQ HSDNTWAVVD VSLDSLRPSP ITRNRRRPSG CLIQELQNGY SKVTWVEHTE
401: VDDRSVHTMY KPLVNTGLAF GAKRWVATLD RQCERLASSM ASNIPTGDLS VITSPEGRKS MLKLAERMVM SFCSGVGASN AHAWTTLATT GSDDVRVMTR
501: KSMDDPGRPP GIVLSAATSF WIPVAPKRVF DFLRDENSRS EWDILSNGGL VQEMAHIANG RDPGNSVSLF RVNSANSGQS NMLILQESCT DASGSYVIYA
601: PVDIMAMNVV LSGGDPDYVA LLPSGFAILP DGSSRVNAMV TSTASNCGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIK CTVERIKAAL ACDGA
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.