Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44946 | Canola | nucleus | 87.25 | 92.9 |
| CDY67945 | Canola | nucleus | 90.58 | 90.71 |
| CDY43137 | Canola | nucleus | 89.28 | 89.4 |
| CDY49937 | Canola | nucleus | 66.23 | 65.85 |
| CDY21211 | Canola | nucleus | 65.94 | 65.56 |
| AT3G03260.1 | Thale cress | nucleus | 63.04 | 62.23 |
| Os06t0208100-00 | Rice | nucleus | 11.01 | 58.91 |
| CDY62389 | Canola | cytosol | 35.51 | 50.1 |
| CDX85461 | Canola | cytosol | 50.0 | 48.94 |
| CDY02713 | Canola | nucleus | 50.29 | 46.96 |
| CDY69499 | Canola | cytosol | 20.0 | 45.39 |
| CDY16938 | Canola | nucleus | 42.9 | 44.85 |
| CDY53691 | Canola | nucleus | 46.09 | 44.79 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 42.61 | 41.18 |
| PGSC0003DMT400038820 | Potato | extracellular | 21.45 | 40.66 |
| Solyc09g057530.1.1 | Tomato | cytosol | 7.83 | 39.42 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 38.84 | 39.12 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 38.7 | 38.98 |
| Zm00001d044973_P001 | Maize | nucleus | 38.55 | 38.61 |
| Zm00001d037140_P004 | Maize | nucleus | 38.41 | 38.57 |
| Zm00001d018225_P001 | Maize | nucleus | 38.41 | 38.29 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 38.55 | 38.16 |
| Zm00001d052133_P001 | Maize | nucleus | 38.26 | 37.82 |
| EER89393 | Sorghum | nucleus | 38.26 | 37.71 |
| Solyc10g018030.1.1 | Tomato | cytosol | 22.32 | 37.29 |
| EES05874 | Sorghum | nucleus | 38.12 | 37.2 |
| GSMUA_Achr10P... | Banana | nucleus | 37.97 | 36.85 |
| PGSC0003DMT400085057 | Potato | cytosol | 25.51 | 36.82 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 32.17 | 36.82 |
| CDX96744 | Canola | nucleus | 35.51 | 36.4 |
| Solyc04g025490.1.1 | Tomato | cytosol | 12.75 | 36.36 |
| Solyc11g011940.1.1 | Tomato | nucleus | 37.68 | 36.26 |
| Solyc09g066070.2.1 | Tomato | cytosol | 22.61 | 36.19 |
| KRH11810 | Soybean | nucleus | 37.25 | 36.04 |
| KRH36827 | Soybean | nucleus | 36.96 | 35.97 |
| CDY42097 | Canola | nucleus | 26.81 | 35.78 |
| Os06t0207966-00 | Rice | plastid | 13.62 | 35.74 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 38.26 | 35.72 |
| PGSC0003DMT400051268 | Potato | cytosol | 25.8 | 35.67 |
| GSMUA_Achr10P... | Banana | nucleus | 35.22 | 35.63 |
| CDX83884 | Canola | nucleus | 35.36 | 35.62 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 35.07 | 35.54 |
| CDY26204 | Canola | nucleus | 32.61 | 35.32 |
| Solyc09g057540.2.1 | Tomato | cytosol | 25.36 | 35.21 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 36.96 | 35.17 |
| CDY11109 | Canola | nucleus | 36.09 | 35.07 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 37.1 | 34.97 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 36.96 | 34.93 |
| CDX68229 | Canola | nucleus | 35.36 | 34.71 |
| Solyc09g060130.1.1 | Tomato | cytosol | 22.32 | 34.68 |
| CDX96471 | Canola | nucleus | 36.09 | 34.68 |
| KRH36826 | Soybean | nucleus | 35.8 | 34.64 |
| CDY21319 | Canola | nucleus | 35.94 | 34.64 |
| CDX76399 | Canola | nucleus | 35.8 | 34.55 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 36.81 | 34.51 |
| CDX90879 | Canola | nucleus | 35.8 | 34.5 |
| CDY19185 | Canola | nucleus | 34.06 | 34.46 |
| CDX72984 | Canola | nucleus | 35.65 | 34.41 |
| Solyc09g066050.2.1 | Tomato | cytosol | 27.54 | 34.36 |
| CDY27417 | Canola | nucleus | 35.36 | 34.17 |
| CDY23096 | Canola | nucleus | 6.52 | 34.09 |
| Solyc07g026570.1.1 | Tomato | nucleus | 6.96 | 34.04 |
| Solyc07g026560.1.1 | Tomato | cytosol | 23.33 | 34.04 |
| Solyc09g066030.1.1 | Tomato | nucleus | 35.65 | 34.02 |
| PGSC0003DMT400051266 | Potato | cytosol | 19.13 | 33.93 |
| CDY26205 | Canola | nucleus | 33.77 | 33.77 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 17.97 | 33.7 |
| CDY16639 | Canola | nucleus | 35.51 | 33.42 |
| CDX94586 | Canola | nucleus | 35.36 | 33.33 |
| Solyc05g015030.1.1 | Tomato | cytosol | 22.9 | 33.33 |
| Solyc11g022420.1.1 | Tomato | cytosol | 23.04 | 33.19 |
| CDY66622 | Canola | nucleus | 35.07 | 33.11 |
| CDX94054 | Canola | nucleus | 33.33 | 33.09 |
| CDX98703 | Canola | nucleus | 33.33 | 33.09 |
| PGSC0003DMT400036411 | Potato | nucleus | 25.07 | 32.95 |
| CDY06167 | Canola | nucleus | 34.35 | 32.92 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 33.33 | 32.9 |
| CDX79091 | Canola | nucleus | 35.22 | 32.57 |
| Solyc09g060170.1.1 | Tomato | cytosol | 16.23 | 32.56 |
| Solyc08g062510.2.1 | Tomato | nucleus | 30.58 | 32.31 |
| Solyc07g037910.1.1 | Tomato | cytosol | 9.86 | 32.23 |
| CDX74762 | Canola | nucleus | 32.75 | 31.92 |
| CDY18903 | Canola | nucleus | 32.61 | 31.91 |
| CDY10041 | Canola | nucleus | 34.49 | 31.86 |
| CDY71572 | Canola | nucleus | 18.12 | 31.81 |
| KRH42428 | Soybean | nucleus | 34.78 | 31.7 |
| Solyc10g018020.1.1 | Tomato | extracellular | 15.36 | 31.55 |
| Solyc08g062520.2.1 | Tomato | cytosol | 22.9 | 30.92 |
| Solyc04g025480.1.1 | Tomato | cytosol | 28.99 | 30.53 |
| CDY31916 | Canola | nucleus | 29.28 | 30.01 |
| CDY00515 | Canola | nucleus | 29.13 | 29.87 |
| CDX89415 | Canola | cytosol, mitochondrion | 7.68 | 29.78 |
| CDY51143 | Canola | nucleus | 33.48 | 29.24 |
| CDX74347 | Canola | nucleus | 33.48 | 29.13 |
| CDY49515 | Canola | plasma membrane | 34.06 | 28.98 |
| CDX91894 | Canola | nucleus | 33.33 | 28.97 |
| CDY07201 | Canola | nucleus | 33.04 | 28.93 |
| CDY48272 | Canola | nucleus | 29.13 | 28.55 |
| CDY12213 | Canola | nucleus | 29.42 | 28.51 |
| CDY45684 | Canola | nucleus | 32.32 | 28.44 |
| CDX67855 | Canola | nucleus | 32.03 | 28.33 |
| CDY46842 | Canola | nucleus | 33.91 | 28.19 |
| CDX76559 | Canola | nucleus | 29.57 | 27.79 |
| CDY08866 | Canola | nucleus | 29.57 | 27.72 |
| KRH42429 | Soybean | cytosol | 29.13 | 27.53 |
| CDY19129 | Canola | nucleus | 28.55 | 27.1 |
| CDX79408 | Canola | nucleus | 30.43 | 26.92 |
| CDY43458 | Canola | nucleus | 31.59 | 26.85 |
| CDY30748 | Canola | endoplasmic reticulum | 22.75 | 26.75 |
| CDX67929 | Canola | nucleus | 30.14 | 26.56 |
| CDY15339 | Canola | nucleus | 28.12 | 26.54 |
| CDX77711 | Canola | nucleus | 31.59 | 26.49 |
| CDY03177 | Canola | nucleus | 31.3 | 26.15 |
| CDY33492 | Canola | nucleus | 30.14 | 26.13 |
| TraesCSU01G150000.1 | Wheat | nucleus | 7.54 | 23.85 |
| CDX89416 | Canola | nucleus | 21.3 | 22.65 |
| TraesCSU01G244000.1 | Wheat | nucleus | 6.67 | 22.33 |
| CDX94443 | Canola | cytosol | 20.29 | 22.29 |
| CDY39874 | Canola | plasma membrane | 4.93 | 17.71 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 2.46 | 14.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078HX26 | UniProt:A0A078HX26 | EnsemblPlants:CDY42301 | ProteinID:CDY42301 |
| ProteinID:CDY42301.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00074541001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI0004EE0160 | : | : | : |
Description
BnaC02g09070DBnaC02g09070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HX26]
Coordinates
chrLK032520:-:195533..199484
Molecular Weight (calculated)
78085.9 Da
IEP (calculated)
5.971
GRAVY (calculated)
-0.353
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYDGDGSQD NQHYTSVNAM SKEKRICHRH SPQQIQMLEA YFKECPHPNE SQRQKFCNEL NLEIDQVKFW FQNKRTQSKA QDERTSNILL RAENEKLQCE
101: NAAMLEALKN VTCPPCGGPP FGREEREPNL HKLRLENPLF KAESDSLAAA KNKYQQTMLD SLTSVQRQQT FEALTSYGMN PYNPFEQPSP SESQTIQPQL
201: LPQMDIPQLS ETAAIAVEEL KQLFLTDEAL WVMSSIDGTY VIDQESYEKF SHSIKHFRNL SARVESSKDV TVVPIEATSL IDMFLDLEKW KMLFPTIVNK
301: AKTIHTLGSE LPIKENCNVL QMIWEQLHIL SPLVPPREFM IVRCCQQIGE RLWIIADVSQ HIVNSDQSIS PSCYKRPSGC LIRSLPNAHT EVRWIEHVEV
401: DHTADTHRMY RELVSGGSGY GARRWIVTLE RMCERMALST ILIMPATDWS ETIPTVEGRK SVMKLGERMV KIFNEMLIMS GKVEFPQQSK CGVRISIRMN
501: MEPGQLPGLV VSAASCLSIP LTPLQVFNSL RSNDTRHQWD VLCHGNAITE TARISTGSSG TNYINLLQPT PPWDIGQNMV QEPHKKMMVL QECYMDALGG
601: MIVYSPLDMA TMSIAASGEV DPLNIPILPS GFTISSDNNR GTVLMLAFQI LISDENSKTR NVSENAADRV SRLISQTVQS IKVMLNCPPE
101: NAAMLEALKN VTCPPCGGPP FGREEREPNL HKLRLENPLF KAESDSLAAA KNKYQQTMLD SLTSVQRQQT FEALTSYGMN PYNPFEQPSP SESQTIQPQL
201: LPQMDIPQLS ETAAIAVEEL KQLFLTDEAL WVMSSIDGTY VIDQESYEKF SHSIKHFRNL SARVESSKDV TVVPIEATSL IDMFLDLEKW KMLFPTIVNK
301: AKTIHTLGSE LPIKENCNVL QMIWEQLHIL SPLVPPREFM IVRCCQQIGE RLWIIADVSQ HIVNSDQSIS PSCYKRPSGC LIRSLPNAHT EVRWIEHVEV
401: DHTADTHRMY RELVSGGSGY GARRWIVTLE RMCERMALST ILIMPATDWS ETIPTVEGRK SVMKLGERMV KIFNEMLIMS GKVEFPQQSK CGVRISIRMN
501: MEPGQLPGLV VSAASCLSIP LTPLQVFNSL RSNDTRHQWD VLCHGNAITE TARISTGSSG TNYINLLQPT PPWDIGQNMV QEPHKKMMVL QECYMDALGG
601: MIVYSPLDMA TMSIAASGEV DPLNIPILPS GFTISSDNNR GTVLMLAFQI LISDENSKTR NVSENAADRV SRLISQTVQS IKVMLNCPPE
001: MDNNGGGSSG NEQYTSGDAK QNGKRTCHRH TPQQIQRLEA YFKECPHPDE RQRNQLCREL KLEPDQIKFW FQNKRTQSKT QEDRSTNVLL RGENETLQSD
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
Arabidopsis Description
HDG8Homeobox-leucine zipper protein HDG8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.