Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 86.61 | 91.19 |
| Solyc09g057530.1.1 | Tomato | cytosol | 15.06 | 78.83 |
| Solyc11g022410.1.1 | Tomato | extracellular | 7.81 | 75.68 |
| Solyc09g066030.1.1 | Tomato | nucleus | 75.59 | 74.97 |
| Solyc09g066050.2.1 | Tomato | cytosol | 57.6 | 74.68 |
| Solyc09g066070.2.1 | Tomato | cytosol | 44.35 | 73.78 |
| Solyc05g015030.1.1 | Tomato | cytosol | 48.12 | 72.78 |
| Solyc11g022420.1.1 | Tomato | cytosol | 48.54 | 72.65 |
| Solyc09g060130.1.1 | Tomato | cytosol | 44.63 | 72.07 |
| Solyc09g060170.1.1 | Tomato | cytosol | 34.31 | 71.51 |
| Solyc08g062510.2.1 | Tomato | nucleus | 64.57 | 70.9 |
| Solyc08g062520.2.1 | Tomato | cytosol | 50.49 | 70.84 |
| Solyc09g057540.2.1 | Tomato | cytosol | 48.54 | 70.02 |
| Solyc11g022430.1.1 | Tomato | cytosol | 17.02 | 68.16 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 34.59 | 67.39 |
| Solyc10g018030.1.1 | Tomato | cytosol | 37.8 | 65.62 |
| Solyc07g026560.1.1 | Tomato | cytosol | 41.84 | 63.42 |
| Solyc04g025490.1.1 | Tomato | cytosol | 20.64 | 61.16 |
| Solyc10g018020.1.1 | Tomato | extracellular | 28.31 | 60.42 |
| Solyc07g037910.1.1 | Tomato | cytosol | 17.57 | 59.72 |
| Solyc04g025480.1.1 | Tomato | cytosol | 53.97 | 59.08 |
| Os06t0208100-00 | Rice | nucleus | 10.46 | 58.14 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 56.07 | 57.51 |
| Solyc07g026570.1.1 | Tomato | nucleus | 9.62 | 48.94 |
| Solyc04g025740.1.1 | Tomato | nucleus | 9.48 | 45.95 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 42.4 | 42.58 |
| AT3G03260.1 | Thale cress | nucleus | 39.05 | 40.06 |
| KRH36827 | Soybean | nucleus | 39.61 | 40.06 |
| KRH11810 | Soybean | nucleus | 39.19 | 39.41 |
| CDY62389 | Canola | cytosol | 26.64 | 39.06 |
| CDX85461 | Canola | cytosol | 38.08 | 38.72 |
| Bra023611.1-P | Field mustard | nucleus | 38.08 | 38.72 |
| KRH36826 | Soybean | nucleus | 37.94 | 38.15 |
| Bra032003.1-P | Field mustard | nucleus | 36.54 | 38.03 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 36.26 | 37.96 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 36.26 | 37.96 |
| CDY43137 | Canola | nucleus | 36.26 | 37.74 |
| CDY42301 | Canola | nucleus | 36.26 | 37.68 |
| Bra020066.1-P | Field mustard | nucleus | 35.7 | 37.54 |
| CDY69499 | Canola | cytosol | 15.9 | 37.5 |
| CDY53691 | Canola | nucleus | 37.1 | 37.46 |
| Bra003213.1-P | Field mustard | nucleus | 37.1 | 37.46 |
| CDY16938 | Canola | nucleus | 34.45 | 37.42 |
| Bra008562.1-P | Field mustard | cytosol, nucleus, plastid | 37.66 | 37.34 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 36.26 | 37.3 |
| Zm00001d018225_P001 | Maize | nucleus | 35.98 | 37.28 |
| Solyc03g098200.2.1 | Tomato | nucleus | 37.38 | 37.17 |
| Zm00001d044973_P001 | Maize | nucleus | 35.7 | 37.16 |
| CDY44946 | Canola | nucleus | 33.47 | 37.04 |
| CDY67945 | Canola | nucleus | 35.56 | 37.01 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 31.1 | 36.98 |
| EER89393 | Sorghum | nucleus | 35.98 | 36.86 |
| Zm00001d052133_P001 | Maize | nucleus | 35.84 | 36.82 |
| GSMUA_Achr10P... | Banana | nucleus | 36.4 | 36.71 |
| Zm00001d037140_P004 | Maize | nucleus | 35.15 | 36.68 |
| CDY49937 | Canola | nucleus | 35.43 | 36.6 |
| CDY02713 | Canola | nucleus | 37.66 | 36.54 |
| CDY21211 | Canola | nucleus | 35.29 | 36.46 |
| Solyc06g072310.2.1 | Tomato | nucleus | 36.4 | 36.4 |
| Bra021363.1-P | Field mustard | nucleus | 36.68 | 36.18 |
| EES05874 | Sorghum | nucleus | 35.56 | 36.07 |
| AT1G34650.1 | Thale cress | nucleus | 35.43 | 35.88 |
| GSMUA_Achr10P... | Banana | nucleus | 34.03 | 35.78 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 36.4 | 35.46 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 36.54 | 35.45 |
| AT5G17320.1 | Thale cress | nucleus | 35.43 | 35.38 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 33.89 | 33.29 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 33.61 | 33.24 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 33.89 | 33.2 |
| Solyc10g005330.2.1 | Tomato | nucleus | 32.36 | 32.58 |
| KRH42428 | Soybean | nucleus | 32.78 | 31.04 |
| Solyc02g080260.2.1 | Tomato | nucleus | 32.5 | 31.03 |
| Solyc03g031760.2.1 | Tomato | cytosol | 27.2 | 31.0 |
| Os06t0207966-00 | Rice | plastid | 10.88 | 29.66 |
| Solyc01g091630.2.1 | Tomato | nucleus | 33.61 | 29.35 |
| KRH42429 | Soybean | cytosol | 29.71 | 29.18 |
| Solyc12g005830.1.1 | Tomato | nucleus | 30.54 | 29.16 |
| Solyc08g076370.2.1 | Tomato | nucleus | 34.03 | 28.98 |
| Solyc07g041850.1.1 | Tomato | nucleus | 26.78 | 28.24 |
| Solyc03g120620.2.1 | Tomato | nucleus | 29.99 | 27.74 |
| Solyc03g026070.2.1 | Tomato | nucleus | 30.4 | 27.01 |
| Solyc06g050160.2.1 | Tomato | nucleus | 23.99 | 26.34 |
| Solyc06g035940.2.1 | Tomato | nucleus | 24.83 | 26.33 |
| Solyc10g006420.2.1 | Tomato | cytosol | 19.25 | 26.19 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | UniProt:K4D5Z9 | PFAM:PD023377 |
| PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 |
| SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:Solyc11g011940.1 |
| EnsemblPlants:Solyc11g011940.1.1 | InterPro:UPF0128 | UniParc:UPI0002769DDE | SEG:seg | : | : |
Description
No Description!
Coordinates
chr11:+:4868757..4876927
Molecular Weight (calculated)
81807.3 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.516
Length
717 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDSGEEHIG ESSNSQKKSK RQRQCHRHTM EQIQRLEAFF KECPHPDENQ RNQLGREAGL DPKQIKFWFQ NKRTQTKTQN ERSDNNALRM ENERFLCENM
101: AMKESMKNIM CPKCDGPPIG KEERARNLEN MKLENQRLRE QHEKASNFLS SILGRSFVMG SNLAPPKSTL QTSSNSSDES LLSQNICGSP IRYPPQENNN
201: NVRAHSININ NIPIMSPSRQ EHYEFHHDNR QRTDTFEIVV ASMNEMFELL QMNDPIWVDS SSDGGCSIHR ESYERIFSNM NRPYKSATAR IESSKDCGVV
301: SMPANELIHS FLDPVKWINL FPTIVTKART IEVLDSGTLG GSVQLMYEKL HILSPLVEAR EFFFIRYCRQ IDPTTWIMVD VSYDLFNEIQ SGVPSYSWKF
401: PSGCAIQDMG NDQSMVTWVE HVQVNEKSQV NHIFRDLLCD RQTYGAKRWI VALQRMSERY NFTMGATCPT RHDFEGVFND PEGLKNTIQL SQRMVKNFFE
501: ILSMTDKLDF PASPQLSSGN RISIRKNEEI TQTKGFIATA SSSLWIPLSF QDVFNFFKDN KTRSKWDILT GGLKMTELAR VSTGTFPENC ITIIQSYLQM
601: EKLVLQESSI DEMGAFLIFA PLELPTMTSI FNGHDATKVP ILPSGIIISP DGRLVSDRGN TENAQNGSIL TVTFQILICD NNNISISQQQ HMEVVNSIHS
701: LLRTTVSKIK AALGCSN
101: AMKESMKNIM CPKCDGPPIG KEERARNLEN MKLENQRLRE QHEKASNFLS SILGRSFVMG SNLAPPKSTL QTSSNSSDES LLSQNICGSP IRYPPQENNN
201: NVRAHSININ NIPIMSPSRQ EHYEFHHDNR QRTDTFEIVV ASMNEMFELL QMNDPIWVDS SSDGGCSIHR ESYERIFSNM NRPYKSATAR IESSKDCGVV
301: SMPANELIHS FLDPVKWINL FPTIVTKART IEVLDSGTLG GSVQLMYEKL HILSPLVEAR EFFFIRYCRQ IDPTTWIMVD VSYDLFNEIQ SGVPSYSWKF
401: PSGCAIQDMG NDQSMVTWVE HVQVNEKSQV NHIFRDLLCD RQTYGAKRWI VALQRMSERY NFTMGATCPT RHDFEGVFND PEGLKNTIQL SQRMVKNFFE
501: ILSMTDKLDF PASPQLSSGN RISIRKNEEI TQTKGFIATA SSSLWIPLSF QDVFNFFKDN KTRSKWDILT GGLKMTELAR VSTGTFPENC ITIIQSYLQM
601: EKLVLQESSI DEMGAFLIFA PLELPTMTSI FNGHDATKVP ILPSGIIISP DGRLVSDRGN TENAQNGSIL TVTFQILICD NNNISISQQQ HMEVVNSIHS
701: LLRTTVSKIK AALGCSN
001: MDNNGGGSSG NEQYTSGDAK QNGKRTCHRH TPQQIQRLEA YFKECPHPDE RQRNQLCREL KLEPDQIKFW FQNKRTQSKT QEDRSTNVLL RGENETLQSD
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
Arabidopsis Description
HDG8Homeobox-leucine zipper protein HDG8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.