Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11810 | Soybean | nucleus | 90.13 | 89.62 |
| Os06t0208100-00 | Rice | nucleus | 9.73 | 53.49 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 52.89 | 52.52 |
| KRH36826 | Soybean | nucleus | 48.38 | 48.11 |
| KRH38939 | Soybean | nucleus | 46.4 | 45.57 |
| KRH09477 | Soybean | nucleus | 45.98 | 45.4 |
| KRH60596 | Soybean | nucleus | 44.71 | 44.46 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 37.52 | 44.11 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 42.6 | 44.09 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 42.6 | 44.09 |
| KRH41898 | Soybean | nucleus | 44.57 | 43.83 |
| Zm00001d018225_P001 | Maize | nucleus | 42.6 | 43.64 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 42.45 | 43.19 |
| GSMUA_Achr10P... | Banana | nucleus | 43.3 | 43.18 |
| Solyc09g057530.1.1 | Tomato | cytosol | 8.32 | 43.07 |
| EES05874 | Sorghum | nucleus | 42.88 | 43.0 |
| Zm00001d052133_P001 | Maize | nucleus | 42.17 | 42.84 |
| PGSC0003DMT400051268 | Potato | cytosol | 29.48 | 41.88 |
| PGSC0003DMT400085057 | Potato | cytosol | 28.21 | 41.84 |
| Zm00001d037140_P004 | Maize | nucleus | 40.48 | 41.78 |
| Solyc09g066070.2.1 | Tomato | cytosol | 25.39 | 41.76 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 43.44 | 41.68 |
| Zm00001d044973_P001 | Maize | nucleus | 40.34 | 41.51 |
| Solyc09g057540.2.1 | Tomato | cytosol | 29.05 | 41.45 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 39.77 | 41.41 |
| PGSC0003DMT400038820 | Potato | extracellular | 21.16 | 41.21 |
| EER89393 | Sorghum | nucleus | 40.62 | 41.14 |
| CDY62389 | Canola | cytosol | 28.35 | 41.1 |
| Solyc09g060130.1.1 | Tomato | cytosol | 25.67 | 40.99 |
| GSMUA_Achr10P... | Banana | nucleus | 39.07 | 40.62 |
| Solyc09g060170.1.1 | Tomato | cytosol | 19.61 | 40.41 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 41.75 | 40.22 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 20.87 | 40.22 |
| Os06t0207966-00 | Rice | plastid | 14.81 | 39.92 |
| Solyc11g022420.1.1 | Tomato | cytosol | 26.94 | 39.87 |
| CDX85461 | Canola | cytosol | 39.63 | 39.86 |
| CDY69499 | Canola | cytosol | 17.07 | 39.8 |
| Bra023611.1-P | Field mustard | nucleus | 39.49 | 39.72 |
| Solyc11g011940.1.1 | Tomato | nucleus | 40.06 | 39.61 |
| AT3G03260.1 | Thale cress | nucleus | 38.79 | 39.34 |
| Solyc10g018030.1.1 | Tomato | cytosol | 22.57 | 38.74 |
| Solyc09g066030.1.1 | Tomato | nucleus | 39.49 | 38.73 |
| Solyc09g066050.2.1 | Tomato | cytosol | 30.18 | 38.7 |
| Solyc08g062510.2.1 | Tomato | nucleus | 35.54 | 38.59 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 39.63 | 38.49 |
| KRH42428 | Soybean | nucleus | 41.04 | 38.44 |
| Solyc04g025490.1.1 | Tomato | cytosol | 13.12 | 38.43 |
| CDY53691 | Canola | nucleus | 38.36 | 38.31 |
| Solyc07g026560.1.1 | Tomato | cytosol | 25.53 | 38.27 |
| Solyc05g015030.1.1 | Tomato | cytosol | 25.53 | 38.19 |
| Bra003213.1-P | Field mustard | nucleus | 38.22 | 38.17 |
| AT5G17320.1 | Thale cress | nucleus | 38.5 | 38.02 |
| CDY02713 | Canola | nucleus | 39.35 | 37.75 |
| Bra032003.1-P | Field mustard | nucleus | 36.67 | 37.74 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 38.5 | 37.66 |
| CDY43137 | Canola | nucleus | 36.53 | 37.59 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 38.79 | 37.57 |
| PGSC0003DMT400051266 | Potato | cytosol | 20.59 | 37.53 |
| Solyc10g018020.1.1 | Tomato | extracellular | 17.77 | 37.5 |
| KRH77881 | Soybean | nucleus | 38.5 | 37.35 |
| Bra008562.1-P | Field mustard | cytosol, nucleus, plastid | 38.08 | 37.34 |
| CDY67945 | Canola | nucleus | 36.25 | 37.3 |
| CDY42301 | Canola | nucleus | 35.97 | 36.96 |
| KRH27601 | Soybean | nucleus | 38.08 | 36.89 |
| AT1G34650.1 | Thale cress | nucleus | 36.81 | 36.86 |
| KRH13175 | Soybean | cytosol | 9.17 | 36.72 |
| Solyc08g062520.2.1 | Tomato | cytosol | 26.38 | 36.59 |
| Bra020066.1-P | Field mustard | nucleus | 34.98 | 36.36 |
| CDY16938 | Canola | nucleus | 33.85 | 36.36 |
| KRH56105 | Soybean | nucleus | 37.38 | 36.35 |
| Bra021363.1-P | Field mustard | nucleus | 36.53 | 35.63 |
| CDY49937 | Canola | nucleus | 34.84 | 35.59 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 34.98 | 35.48 |
| CDY44946 | Canola | nucleus | 32.3 | 35.34 |
| CDY21211 | Canola | nucleus | 34.56 | 35.3 |
| Solyc04g025480.1.1 | Tomato | cytosol | 32.44 | 35.11 |
| PGSC0003DMT400036411 | Potato | nucleus | 25.95 | 35.05 |
| KRG91238 | Soybean | nucleus | 35.83 | 34.75 |
| KRH74360 | Soybean | nucleus | 38.65 | 34.73 |
| Solyc07g037910.1.1 | Tomato | cytosol | 10.3 | 34.6 |
| KRH25398 | Soybean | plastid | 37.09 | 34.56 |
| KRH22554 | Soybean | nucleus | 37.66 | 34.19 |
| KRH35356 | Soybean | nucleus | 36.81 | 34.12 |
| KRH26803 | Soybean | nucleus | 37.52 | 34.06 |
| KRG91457 | Soybean | nucleus | 37.24 | 33.98 |
| KRH39579 | Soybean | nucleus | 38.22 | 33.88 |
| KRH42429 | Soybean | cytosol | 34.41 | 33.42 |
| KRH38560 | Soybean | nucleus | 36.53 | 33.38 |
| KRH00641 | Soybean | nucleus | 38.08 | 32.85 |
| KRH40539 | Soybean | nucleus | 37.8 | 32.68 |
| KRH09109 | Soybean | plastid | 35.68 | 32.65 |
| KRH48236 | Soybean | nucleus | 38.08 | 32.57 |
| KRH65144 | Soybean | nucleus | 37.8 | 32.06 |
| Solyc07g026570.1.1 | Tomato | nucleus | 6.35 | 31.91 |
| KRH35579 | Soybean | nucleus | 34.41 | 31.36 |
| KRH47277 | Soybean | nucleus | 32.72 | 30.89 |
| KRH09884 | Soybean | plastid | 32.3 | 30.49 |
| KRH44348 | Soybean | nucleus | 32.16 | 30.48 |
| KRH23432 | Soybean | plastid | 32.3 | 30.05 |
| KRH22254 | Soybean | cytosol | 20.03 | 26.54 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 11.42 | 24.55 |
| TraesCSU01G150000.1 | Wheat | nucleus | 6.63 | 21.56 |
| TraesCSU01G244000.1 | Wheat | nucleus | 5.5 | 18.93 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 2.12 | 12.61 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | EMBL:ACUP02005397 | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G025900 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 | UniProt:K7LBG8 | EnsemblPlants:KRH36827 |
| ProteinID:KRH36827 | ProteinID:KRH36827.1 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI000294EBF4 | : | : |
Description
hypothetical protein
Coordinates
chr9:+:2116516..2122631
Molecular Weight (calculated)
79702.1 Da
IEP (calculated)
6.213
GRAVY (calculated)
-0.351
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPGGSGDE GSHQGRRPSY KRLSSAQTAR LERFIKDCPH PDEAQRRQLA SEIGLETKQI KFWFQNKRTQ IKNQHERADN TALRVENDRI HTENLLMKEA
101: LKNMLCSSCG GAPCQEEDHE HAIQNMQLEN AQLKEEHEKV SSLLARYLEK QMSPPELQQQ AFNIPIIGSS SHAPELENSS INYEIGGSSS SHGPSRYGMQ
201: IMVSDDHNLL RSEGIEKALM FKVAAAAMNE LVRLIRINEP LWTKSSTQDG KPILQHENYE KIFPRTNSFK GANLRVEATK ESGIVSINSI QLIDMFLDPD
301: KWVNLFPTIV TKAETMKVIE NGLVGSRSGA LQLMFEQMHV LSPLVQPREF QFLRYCQQIE EGVWVIADVS FDSFRQKTSF FHSWRHPSGC MIQEMPNGCS
401: MVTWVEHVEV DDKIQTHQLY KDLIATGIAY GAERWIMELQ RICERFACFY VERIPSQDSG GVINSLEGRR SVMNFSHRMI KVFCESLTMS GNLDFPHMNM
501: ENNSGLRVSI RKNRNHLGQP KGMIVVAATS IWLPLHYMKV FEFFTDDRRR AQWDVLCFGN DANKVAHISN EIHPGNCISI YRPFIPNENN ALVLQESFTT
601: PMGSYVVYAP TDVAAMNSAI NGEDSSMLPV LPSGFVISAD GEPNAALGAF NSSDIERLGG SLLTVAFQIL ASSPDGINMS NMESVEAVNS LLTSTILKVK
701: DALNCNNLE
101: LKNMLCSSCG GAPCQEEDHE HAIQNMQLEN AQLKEEHEKV SSLLARYLEK QMSPPELQQQ AFNIPIIGSS SHAPELENSS INYEIGGSSS SHGPSRYGMQ
201: IMVSDDHNLL RSEGIEKALM FKVAAAAMNE LVRLIRINEP LWTKSSTQDG KPILQHENYE KIFPRTNSFK GANLRVEATK ESGIVSINSI QLIDMFLDPD
301: KWVNLFPTIV TKAETMKVIE NGLVGSRSGA LQLMFEQMHV LSPLVQPREF QFLRYCQQIE EGVWVIADVS FDSFRQKTSF FHSWRHPSGC MIQEMPNGCS
401: MVTWVEHVEV DDKIQTHQLY KDLIATGIAY GAERWIMELQ RICERFACFY VERIPSQDSG GVINSLEGRR SVMNFSHRMI KVFCESLTMS GNLDFPHMNM
501: ENNSGLRVSI RKNRNHLGQP KGMIVVAATS IWLPLHYMKV FEFFTDDRRR AQWDVLCFGN DANKVAHISN EIHPGNCISI YRPFIPNENN ALVLQESFTT
601: PMGSYVVYAP TDVAAMNSAI NGEDSSMLPV LPSGFVISAD GEPNAALGAF NSSDIERLGG SLLTVAFQIL ASSPDGINMS NMESVEAVNS LLTSTILKVK
701: DALNCNNLE
001: MEFLGDSQNH DSSETEKKNK KKKRFHRHTP HQIQRLESTF NECQHPDEKQ RNQLSRELGL APRQIKFWFQ NRRTQKKAQH ERADNCALKE ENDKIRCENI
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA
Arabidopsis Description
HDG12Uncharacterized protein At1g17920 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.