CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0627000-02	Rice	cytosol, peroxisome	75.71	22.87
KRH56105	Soybean	nucleus	88.14	21.4
GSMUA_Achr3P23090_001	Banana	endoplasmic reticulum, plasma membrane	78.53	21.06
KRH25398	Soybean	plastid	87.57	20.37
VIT_12s0059g02310.t01	Wine grape	nucleus	83.62	19.55
KRH22554	Soybean	nucleus	84.18	19.08
KRH26803	Soybean	nucleus	83.62	18.95
GSMUA_Achr8P07310_001	Banana	mitochondrion, nucleus	76.84	18.73
KRH27601	Soybean	nucleus	74.58	18.03
KRH77881	Soybean	nucleus	73.45	17.78
GSMUA_Achr11P...	Banana	plastid	76.84	17.24
GSMUA_Achr10P...	Banana	nucleus	67.8	16.78
EES13460	Sorghum	mitochondrion, nucleus	73.45	16.65
EES11464	Sorghum	nucleus	74.01	16.6
Zm00001d002234_P003	Maize	nucleus	74.01	16.5
TraesCS2B01G497500.1	Wheat	nucleus	71.75	16.39
TraesCS2D01G473700.1	Wheat	nucleus	71.75	16.37
TraesCS2A01G474000.1	Wheat	nucleus	71.75	16.34
Zm00001d049443_P005	Maize	nucleus	73.45	16.33
Os08t0136100-01	Rice	nucleus	70.62	15.92
Zm00001d026351_P003	Maize	nucleus	74.58	15.64
KRG91238	Soybean	nucleus	63.28	15.32
Zm00001d024701_P001	Maize	nucleus	68.36	15.18
TraesCS7A01G308400.1	Wheat	nucleus	67.23	14.95
TraesCS7D01G305200.1	Wheat	nucleus	67.23	14.95
TraesCS7B01G208600.1	Wheat	nucleus	67.23	14.91
EES14500	Sorghum	nucleus	68.36	14.86
KRH35579	Soybean	nucleus	63.84	14.52
Zm00001d000247_P001	Maize	plasma membrane	58.76	14.46
KRH22254	Soybean	cytosol	40.68	13.46
KRH35356	Soybean	nucleus	55.93	12.94
KRH40539	Soybean	nucleus	59.89	12.93
KRH48236	Soybean	nucleus	60.45	12.91
KRH60596	Soybean	nucleus	51.41	12.76
KRG91457	Soybean	nucleus	55.93	12.74
KRH00641	Soybean	nucleus	58.76	12.65
KRH38939	Soybean	nucleus	51.41	12.6
KRH09477	Soybean	nucleus	50.85	12.53
KRH41898	Soybean	nucleus	50.85	12.48
KRH65144	Soybean	nucleus	58.76	12.44
KRH09109	Soybean	plastid	53.67	12.26
KRH38560	Soybean	nucleus	52.54	11.98
KRH44348	Soybean	nucleus	46.33	10.96
KRH47277	Soybean	nucleus	46.33	10.92
KRH09884	Soybean	plastid	44.63	10.52
KRH23432	Soybean	plastid	45.2	10.5
KRH27078	Soybean	extracellular, golgi, peroxisome	18.64	10.0
KRH74360	Soybean	nucleus	44.07	9.89
KRH39579	Soybean	nucleus	44.63	9.88
KRH42428	Soybean	nucleus	41.81	9.78
KRH11810	Soybean	nucleus	38.98	9.68
KRH36827	Soybean	nucleus	36.72	9.17
KRH36826	Soybean	nucleus	34.46	8.56
KRH42429	Soybean	cytosol	32.77	7.95
Os08t0187500-01	Rice	nucleus	6.78	3.68
CDY23096	Canola	nucleus	1.69	2.27

Protein Annotations

EMBL:ACUP02009667	EnsemblPlants:KRH13175	EnsemblPlantsGene:GLYMA_15G220200	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289
InterPro:IPR002913	InterPro:START_lipid-bd_dom	PANTHER:PTHR24326	PANTHER:PTHR24326:SF507	PFAM:PF01852	ProteinID:KRH13175
ProteinID:KRH13175.1	SEG:seg	SUPFAM:SSF55961	UniParc:UPI0002952579	UniProt:K7MD18	MapMan:15.5.3.3

Description

hypothetical protein

Coordinates

chr15:+:39672697..39673815

Molecular Weight (calculated)

19483.5 Da

IEP (calculated)

9.319

GRAVY (calculated)

-0.264

Length

177 amino acids

Sequence
(BLAST)

001: MTLEVLSKGV VGNYNGALQV MTAELQLPTP IQHANGTWDV VDVSLDNLPL SPSSRCRRRP SGCLIQEMPN GYSKVRDTMI TNQEGRKSMM KLAERMVISF
101: CAGVSASTAH TWTTLSGTSA DDVRVMTRKS VYDPGRPPGI VLSAATSFWL HVPPKRVFDF LRDENSRNEV CAKIPKS

Best Arabidopsis Sequence Match ( AT1G05230.12 )
(BLAST)

001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNVSYTGF

Arabidopsis Description

HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.