Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13175 | Soybean | cytosol | 22.87 | 75.71 |
| Solyc03g031760.2.1 | Tomato | cytosol | 77.3 | 72.02 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 80.2 | 71.21 |
| EES11464 | Sorghum | nucleus | 89.76 | 66.67 |
| PGSC0003DMT400061859 | Potato | nucleus | 76.96 | 65.46 |
| Zm00001d002234_P003 | Maize | nucleus | 85.84 | 63.35 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 77.99 | 62.95 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 77.47 | 62.53 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 82.76 | 62.5 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 82.59 | 62.45 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 82.59 | 62.29 |
| HORVU2Hr1G106970.2 | Barley | nucleus, plastid | 82.59 | 62.29 |
| CDX90879 | Canola | nucleus | 75.6 | 61.87 |
| CDY21319 | Canola | nucleus | 75.43 | 61.73 |
| Zm00001d026351_P003 | Maize | nucleus | 88.57 | 61.49 |
| CDX98703 | Canola | nucleus | 72.53 | 61.15 |
| KRH56105 | Soybean | nucleus | 75.94 | 61.04 |
| CDX94054 | Canola | nucleus | 72.18 | 60.86 |
| PGSC0003DMT400029291 | Potato | nucleus | 72.18 | 60.69 |
| AT4G04890.1 | Thale cress | nucleus | 76.62 | 60.43 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 77.99 | 60.37 |
| CDY27417 | Canola | nucleus | 73.55 | 60.36 |
| CDX94586 | Canola | nucleus | 75.09 | 60.11 |
| CDY16639 | Canola | nucleus | 75.09 | 60.03 |
| CDX76399 | Canola | nucleus | 73.04 | 59.86 |
| Bra029527.1-P | Field mustard | nucleus | 75.94 | 59.73 |
| Solyc10g005330.2.1 | Tomato | nucleus | 72.35 | 59.55 |
| Bra038757.1-P | Field mustard | nucleus | 73.38 | 59.31 |
| AT4G21750.3 | Thale cress | nucleus | 76.96 | 59.19 |
| PGSC0003DMT400005277 | Potato | nucleus | 73.72 | 58.94 |
| KRH27601 | Soybean | nucleus | 73.38 | 58.74 |
| KRH77881 | Soybean | nucleus | 73.21 | 58.69 |
| AT1G05230.5 | Thale cress | nucleus | 72.18 | 58.67 |
| Bra015401.1-P | Field mustard | nucleus | 72.01 | 58.61 |
| CDY06167 | Canola | nucleus | 71.84 | 58.47 |
| Bra032478.1-P | Field mustard | nucleus | 71.5 | 58.28 |
| KRH25398 | Soybean | plastid | 75.6 | 58.21 |
| CDY66622 | Canola | nucleus | 72.35 | 58.0 |
| Solyc02g080260.2.1 | Tomato | nucleus | 73.72 | 57.52 |
| Bra020872.1-P | Field mustard | nucleus | 73.38 | 57.49 |
| CDX79091 | Canola | nucleus | 73.04 | 57.37 |
| GSMUA_Achr11P... | Banana | plastid | 77.13 | 57.29 |
| Bra000807.1-P | Field mustard | nucleus | 58.36 | 57.29 |
| KRH22554 | Soybean | nucleus | 76.11 | 57.11 |
| KRH26803 | Soybean | nucleus | 76.11 | 57.11 |
| GSMUA_Achr10P... | Banana | nucleus | 68.94 | 56.5 |
| CDY10041 | Canola | nucleus | 71.67 | 56.22 |
| Os08t0136100-01 | Rice | nucleus | 74.4 | 55.54 |
| Bra013556.1-P | Field mustard | nucleus | 63.99 | 54.35 |
| Os06t0207966-00 | Rice | plastid | 23.89 | 53.23 |
| CDY49515 | Canola | plasma membrane | 72.18 | 52.16 |
| CDY46842 | Canola | nucleus | 72.01 | 50.84 |
| KRG91238 | Soybean | nucleus | 61.26 | 49.11 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 18.26 | 45.15 |
| KRH35579 | Soybean | nucleus | 59.22 | 44.6 |
| PGSC0003DMT400037397 | Potato | cytosol | 33.79 | 40.33 |
| Os02t0674800-01 | Rice | nucleus | 53.92 | 39.3 |
| CDY71572 | Canola | nucleus | 26.11 | 38.93 |
| Solyc10g006420.2.1 | Tomato | cytosol | 34.81 | 38.71 |
| KRH22254 | Soybean | cytosol | 35.15 | 38.5 |
| Os04t0569100-01 | Rice | nucleus | 51.02 | 37.1 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 20.31 | 36.06 |
| Os01t0788800-01 | Rice | nucleus | 32.08 | 29.89 |
| Os10t0575600-01 | Rice | nucleus | 42.83 | 28.46 |
| Os08t0292000-01 | Rice | nucleus | 29.52 | 21.87 |
| Os09t0526300-00 | Rice | nucleus | 3.75 | 16.79 |
| Os06t0208100-00 | Rice | nucleus | 3.24 | 14.73 |
| Os08t0187500-01 | Rice | nucleus | 6.83 | 12.27 |
| CDY23096 | Canola | nucleus | 1.19 | 5.3 |
| Os01t0760800-00 | Rice | nucleus | 1.19 | 5.22 |
Protein Annotations
| MapMan:15.5.3.3 | Gene3D:3.30.530.20 | UniProt:A0A0P0WFC7 | ProteinID:BAS91126.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR002913 | InterPro:IPR023393 | EnsemblPlantsGene:Os04g0627000 |
| EnsemblPlants:Os04t0627000-02 | PFAM:PF01852 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF513 | SMART:SM00234 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI000393BC2C | SEG:seg | : |
Description
RICE OUTMOST CELL-SPECIFIC GENE 2Similar to Homeobox-leucine zipper protein ROC2. (Os04t0627000-01);Similar to Homeobox-leucine zipper protein ROC2. (Os04t0627000-02)
Coordinates
chr4:-:31900217..31903678
Molecular Weight (calculated)
62461.7 Da
IEP (calculated)
4.798
GRAVY (calculated)
0.032
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: GPAALGEMSF DEHHLRIENA RLREEIDRIS AIAAKYVGKP MVPFPVLSNP MAAAASRAPL DLPVAPYGVP GDMFGGGGAG ELLRGVQSEV DKPMIVELAV
101: AAMEELVRMA QLDEPLWSVA PPLDATAAAM ETLSEEEYAR MFPRGLGPKQ YGLRSEASRD SAVVIMTHAN LVEILMDANQ YAAVFSNIVS RAITLEVLST
201: GVAGNYNGAL QVMSVEFQVP SPLVPTRESY FVRYCKQNAD GTWAVVDVSL DSLRPSPVLK CRRRPSGCLI QEMPNGYSKV TWVEHVEVDD RSVHNIYKLL
301: VNSGLAFGAR RWVGTLDRQC ERLASVMASN IPTSDIGVIT SSEGRKSMLK LAERMVVSFC GGVTASVAHQ WTTLSGSGAE DVRVMTRKSV DDPGRPPGIV
401: LNAATSFWLP VPPKRVFDFL RDESSRSEWD ILSNGGIVQE MAHIANGRDQ GNCVSLLRVN SSNSNQSNML ILQESCTDAS GSYVIYAPVD VVAMNVVLNG
501: GDPDYVALLP SGFAILPDGP AHDGGDGDGG VGVGSGGSLL TVAFQILVDS VPTAKLSLGS VATVNSLIAC TVERIKAAVS GESNPQ
101: AAMEELVRMA QLDEPLWSVA PPLDATAAAM ETLSEEEYAR MFPRGLGPKQ YGLRSEASRD SAVVIMTHAN LVEILMDANQ YAAVFSNIVS RAITLEVLST
201: GVAGNYNGAL QVMSVEFQVP SPLVPTRESY FVRYCKQNAD GTWAVVDVSL DSLRPSPVLK CRRRPSGCLI QEMPNGYSKV TWVEHVEVDD RSVHNIYKLL
301: VNSGLAFGAR RWVGTLDRQC ERLASVMASN IPTSDIGVIT SSEGRKSMLK LAERMVVSFC GGVTASVAHQ WTTLSGSGAE DVRVMTRKSV DDPGRPPGIV
401: LNAATSFWLP VPPKRVFDFL RDESSRSEWD ILSNGGIVQE MAHIANGRDQ GNCVSLLRVN SSNSNQSNML ILQESCTDAS GSYVIYAPVD VVAMNVVLNG
501: GDPDYVALLP SGFAILPDGP AHDGGDGDGG VGVGSGGSLL TVAFQILVDS VPTAKLSLGS VATVNSLIAC TVERIKAAVS GESNPQ
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.