Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0208100-00 | Rice | nucleus | 5.69 | 34.88 |
| Os09t0526300-00 | Rice | nucleus | 5.31 | 32.06 |
| Zm00001d019477_P001 | Maize | nucleus | 28.82 | 30.98 |
| EER98409 | Sorghum | nucleus | 28.19 | 30.55 |
| Zm00001d004234_P001 | Maize | nucleus | 27.05 | 30.27 |
| OQU81174 | Sorghum | nucleus | 27.56 | 29.54 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 21.87 | 29.52 |
| OQU81266 | Sorghum | nucleus | 28.32 | 29.13 |
| Os02t0674800-01 | Rice | nucleus | 28.57 | 28.11 |
| TraesCS5B01G330300.1 | Wheat | nucleus | 26.68 | 28.1 |
| TraesCS5D01G335900.1 | Wheat | nucleus | 26.68 | 28.02 |
| TraesCS5A01G330200.1 | Wheat | nucleus | 25.79 | 27.42 |
| Os08t0136100-01 | Rice | nucleus | 27.18 | 27.39 |
| Os04t0569100-01 | Rice | nucleus | 27.56 | 27.05 |
| HORVU5Hr1G083940.3 | Barley | nucleus | 26.3 | 26.8 |
| TraesCS4A01G231300.2 | Wheat | nucleus | 26.04 | 26.68 |
| Os06t0207966-00 | Rice | plastid | 8.6 | 25.86 |
| Zm00001d004230_P030 | Maize | nucleus | 26.3 | 25.55 |
| TraesCS4B01G084700.16 | Wheat | extracellular, golgi | 26.04 | 25.4 |
| TraesCS4D01G082600.1 | Wheat | nucleus | 25.66 | 25.22 |
| Os01t0788800-01 | Rice | nucleus | 18.96 | 23.85 |
| Os01t0760800-00 | Rice | nucleus | 3.92 | 23.13 |
| Os10t0575600-01 | Rice | nucleus | 24.65 | 22.11 |
| Os08t0187500-01 | Rice | nucleus | 6.83 | 16.56 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | UniProt:A0A0N7KPL6 | ProteinID:BAT04762.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| EnsemblPlantsGene:Os08g0292000 | EnsemblPlants:Os08t0292000-01 | PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF236 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI000393A260 | SEG:seg | : | : | : |
Description
Homeobox domain containing protein. (Os08t0292000-01);Hypothetical conserved gene. (Os08t0292000-02)
Coordinates
chr8:+:11702643..11711035
Molecular Weight (calculated)
87238.8 Da
IEP (calculated)
8.048
GRAVY (calculated)
-0.234
Length
791 amino acids
Sequence
(BLAST)
(BLAST)
001: WIGEVMNGEL KLMASYVSKL KFILQKDQQQ EPHTANLLVL LGSSNQDKRN GLSQGENRMD TCTRKKPRRY QLLTMQQKET LNRAFQSCPN PDRNDLKKLA
101: KELNMTETQI KYWFQNCRTK MKKFKNNEER KLLQKENEEL KKENAELRNR MKNSTCRACD LPLFHIDCRH WENPMLNKGN HGVTSNLIPQ AVSSLLPSSS
201: GFVASGSNLS SNAVLMPVSA MPSSVLQPAP AVSGANFPIL HNLSANANDG YTEKNVLLDL ANRAMEEFFS LMKENESLLV KKKENGPLWL PHMDILGVES
301: LNYQEYLAKS RTIGQKPVDF KVVVTRDTAI VNGSCVDLVK SLLDANRWRE LFPGIVASAN TTKIISTGPS NLHDGLLQLM RAELQVMSPE VPVCDVTFLR
401: QSVQFGSGLW CVVDVSIDTI LPGESKTAQS SVQTSSTAAR RMEVRLLPSG CVIEEMENGY SKVTWMVHAA YDERAVPVLY HSLLRSAKAL GACRWVASLQ
501: RHSQFLSGLH KYIFCPDSTM TEVVMRRKVL YLVKQMTSSF TGLFASMSKA TLQDGDDTHF AHQIVGGATG EPAGLLLSAT TTIWLPGVNP RHVYDHLRDE
601: QCHGEWRCLL GEQLHQGNAL PYGAPLNGET VPEFYRMVNG LHEGHAISLI SPREMGGNIS NTLLLQEART DLSGSLIVYA RTDVNTVHSI MNSGLNPATV
701: FLVSSGCAIL PDCLESFPLH PAATADQAGT SSAAIASRSE TGGSFVTVTY QMFFSSQGGA APASSSIHQG RDALKKATDI FKVVLDTLTV A
101: KELNMTETQI KYWFQNCRTK MKKFKNNEER KLLQKENEEL KKENAELRNR MKNSTCRACD LPLFHIDCRH WENPMLNKGN HGVTSNLIPQ AVSSLLPSSS
201: GFVASGSNLS SNAVLMPVSA MPSSVLQPAP AVSGANFPIL HNLSANANDG YTEKNVLLDL ANRAMEEFFS LMKENESLLV KKKENGPLWL PHMDILGVES
301: LNYQEYLAKS RTIGQKPVDF KVVVTRDTAI VNGSCVDLVK SLLDANRWRE LFPGIVASAN TTKIISTGPS NLHDGLLQLM RAELQVMSPE VPVCDVTFLR
401: QSVQFGSGLW CVVDVSIDTI LPGESKTAQS SVQTSSTAAR RMEVRLLPSG CVIEEMENGY SKVTWMVHAA YDERAVPVLY HSLLRSAKAL GACRWVASLQ
501: RHSQFLSGLH KYIFCPDSTM TEVVMRRKVL YLVKQMTSSF TGLFASMSKA TLQDGDDTHF AHQIVGGATG EPAGLLLSAT TTIWLPGVNP RHVYDHLRDE
601: QCHGEWRCLL GEQLHQGNAL PYGAPLNGET VPEFYRMVNG LHEGHAISLI SPREMGGNIS NTLLLQEART DLSGSLIVYA RTDVNTVHSI MNSGLNPATV
701: FLVSSGCAIL PDCLESFPLH PAATADQAGT SSAAIASRSE TGGSFVTVTY QMFFSSQGGA APASSSIHQG RDALKKATDI FKVVLDTLTV A
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.