Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89393 | Sorghum | nucleus | 79.09 | 29.71 |
| Zm00001d037140_P004 | Maize | nucleus | 76.81 | 29.4 |
| Zm00001d044973_P001 | Maize | nucleus | 75.67 | 28.88 |
| CDY69499 | Canola | cytosol | 31.56 | 27.3 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 53.23 | 23.89 |
| GSMUA_Achr10P... | Banana | nucleus | 64.26 | 23.77 |
| KRH38939 | Soybean | nucleus | 65.02 | 23.68 |
| KRH09477 | Soybean | nucleus | 64.64 | 23.68 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 64.26 | 22.96 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 62.74 | 22.76 |
| VIT_17s0053g00780.t01 | Wine grape | nucleus | 61.22 | 22.68 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 62.74 | 22.54 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 62.36 | 22.47 |
| Solyc03g098200.2.1 | Tomato | nucleus | 61.22 | 22.33 |
| KRH60596 | Soybean | nucleus | 60.46 | 22.3 |
| KRH41898 | Soybean | nucleus | 60.08 | 21.91 |
| GSMUA_Achr10P... | Banana | nucleus | 56.27 | 21.7 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 60.84 | 21.65 |
| PGSC0003DMT400069312 | Potato | nucleus | 58.17 | 21.4 |
| Solyc06g072310.2.1 | Tomato | nucleus | 58.17 | 21.34 |
| CDX96744 | Canola | nucleus | 53.99 | 21.1 |
| Bra016578.1-P | Field mustard | nucleus | 54.75 | 21.05 |
| CDX83884 | Canola | nucleus | 54.75 | 21.02 |
| Bra025938.1-P | Field mustard | nucleus | 53.99 | 20.46 |
| AT1G17920.1 | Thale cress | nucleus | 53.23 | 20.38 |
| CDY26205 | Canola | nucleus | 53.23 | 20.29 |
| Solyc10g018020.1.1 | Tomato | extracellular | 25.86 | 20.24 |
| CDY19185 | Canola | nucleus | 52.47 | 20.23 |
| AT1G73360.1 | Thale cress | nucleus | 54.37 | 19.81 |
| CDX72984 | Canola | nucleus | 52.85 | 19.44 |
| CDX96471 | Canola | nucleus | 52.85 | 19.36 |
| CDX68229 | Canola | nucleus | 51.71 | 19.35 |
| Bra003846.1-P | Field mustard | nucleus | 51.71 | 19.29 |
| Solyc09g066070.2.1 | Tomato | cytosol | 31.56 | 19.26 |
| Bra015996.1-P | Field mustard | nucleus | 52.47 | 19.25 |
| Solyc09g060170.1.1 | Tomato | cytosol | 25.1 | 19.19 |
| PGSC0003DMT400085057 | Potato | cytosol | 34.6 | 19.04 |
| CDY11109 | Canola | nucleus | 51.33 | 19.01 |
| CDY62389 | Canola | cytosol | 33.46 | 18.0 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 48.67 | 17.93 |
| Os08t0136100-01 | Rice | nucleus | 52.47 | 17.58 |
| PGSC0003DMT400051268 | Potato | cytosol | 33.08 | 17.43 |
| CDY26204 | Canola | nucleus | 42.21 | 17.43 |
| Solyc04g025490.1.1 | Tomato | cytosol | 15.59 | 16.94 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 38.4 | 16.75 |
| Solyc08g062520.2.1 | Tomato | cytosol | 31.94 | 16.44 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 22.81 | 16.3 |
| PGSC0003DMT400036411 | Potato | nucleus | 32.32 | 16.19 |
| Os02t0674800-01 | Rice | nucleus | 48.29 | 15.8 |
| Solyc10g018030.1.1 | Tomato | cytosol | 24.33 | 15.5 |
| HORVU7Hr1G035230.2 | Barley | nucleus | 43.35 | 15.32 |
| KRH11810 | Soybean | nucleus | 41.44 | 15.29 |
| Os04t0569100-01 | Rice | nucleus | 46.39 | 15.14 |
| Solyc09g060130.1.1 | Tomato | cytosol | 25.48 | 15.09 |
| Solyc09g057540.2.1 | Tomato | cytosol | 28.14 | 14.89 |
| Solyc11g022420.1.1 | Tomato | cytosol | 27.0 | 14.82 |
| KRH36827 | Soybean | nucleus | 39.92 | 14.81 |
| AT3G03260.1 | Thale cress | nucleus | 38.02 | 14.31 |
| Solyc07g026560.1.1 | Tomato | cytosol | 25.48 | 14.16 |
| Solyc09g066050.2.1 | Tomato | cytosol | 29.28 | 13.92 |
| Bra020066.1-P | Field mustard | nucleus | 35.74 | 13.78 |
| CDY49937 | Canola | nucleus | 36.12 | 13.69 |
| Bra032003.1-P | Field mustard | nucleus | 35.74 | 13.64 |
| CDY67945 | Canola | nucleus | 35.74 | 13.64 |
| CDY42301 | Canola | nucleus | 35.74 | 13.62 |
| Bra023611.1-P | Field mustard | nucleus | 36.5 | 13.62 |
| CDX85461 | Canola | cytosol | 36.5 | 13.62 |
| Solyc04g025480.1.1 | Tomato | cytosol | 33.84 | 13.59 |
| CDY21211 | Canola | nucleus | 35.74 | 13.54 |
| AT5G17320.1 | Thale cress | nucleus | 36.88 | 13.51 |
| CDY43137 | Canola | nucleus | 34.98 | 13.35 |
| KRH42429 | Soybean | cytosol | 36.5 | 13.15 |
| PGSC0003DMT400051266 | Potato | cytosol | 19.39 | 13.11 |
| Solyc08g062510.2.1 | Tomato | nucleus | 32.32 | 13.02 |
| AT1G34650.1 | Thale cress | nucleus | 34.98 | 12.99 |
| Bra021363.1-P | Field mustard | nucleus | 35.74 | 12.93 |
| Os10t0575600-01 | Rice | nucleus | 43.35 | 12.93 |
| CDY02713 | Canola | nucleus | 36.12 | 12.86 |
| PGSC0003DMT400038820 | Potato | extracellular | 17.49 | 12.64 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 32.7 | 12.63 |
| KRH42428 | Soybean | nucleus | 35.74 | 12.42 |
| KRH36826 | Soybean | nucleus | 33.46 | 12.34 |
| CDY53691 | Canola | nucleus | 33.08 | 12.25 |
| Os01t0788800-01 | Rice | nucleus | 29.28 | 12.24 |
| Bra003213.1-P | Field mustard | nucleus | 32.7 | 12.11 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 30.8 | 11.59 |
| Bra008562.1-P | Field mustard | cytosol, nucleus, plastid | 31.56 | 11.48 |
| CDY44946 | Canola | nucleus | 27.76 | 11.27 |
| Solyc09g066030.1.1 | Tomato | nucleus | 30.8 | 11.2 |
| Solyc11g011940.1.1 | Tomato | nucleus | 29.66 | 10.88 |
| CDY42097 | Canola | nucleus | 19.01 | 9.67 |
| Os08t0292000-01 | Rice | nucleus | 25.86 | 8.6 |
| Solyc09g057530.1.1 | Tomato | cytosol | 4.18 | 8.03 |
| CDY16938 | Canola | nucleus | 19.77 | 7.88 |
| Os08t0187500-01 | Rice | nucleus | 5.32 | 4.29 |
| Solyc05g015030.1.1 | Tomato | cytosol | 7.22 | 4.01 |
| TraesCSU01G244000.1 | Wheat | nucleus | 1.9 | 2.43 |
| TraesCSU01G150000.1 | Wheat | nucleus | 1.9 | 2.29 |
| Bra007562.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 0.0 | 0.0 |
| Os01t0760800-00 | Rice | nucleus | 0.0 | 0.0 |
| Os06t0208100-00 | Rice | nucleus | 0.0 | 0.0 |
| Os09t0526300-00 | Rice | nucleus | 0.0 | 0.0 |
| Solyc07g026570.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc07g037910.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os06t0207966-00 | EnsemblPlantsGene:Os06g0207966 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF507 | ProteinID:BAS96717.1 | SEG:seg |
| SUPFAM:SSF55961 | UniParc:UPI0003938FBB | UniProt:A0A0P0WUD5 | MapMan:15.5.3.3 | : | : |
Description
RICE OUTMOST CELL-SPECIFIC GENE 8Similar to Homeobox-leucine zipper protein ROC8. (Os06t0207966-00)
Coordinates
chr6:-:5499342..5500323
Molecular Weight (calculated)
26983.0 Da
IEP (calculated)
6.938
GRAVY (calculated)
0.017
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGHAVTPEG KRSMMKLSQR MVNSFCSSLG ASQMHQWTTL SGSNEVSVRV TMHRSTDPGQ PNGVVLSAAT SIWLPVPCDH VFAFVRDENT RSQWDVLSHG
101: NQVQEVSRIP NGSNPGNCIS LLRGLNASQN SMLILQESCT DASGSLVVYS PIDIPAANVV MSGEDPSSIP LLPSGFTILP DGRPGSAAGA STSSAGPLAA
201: ARGGGGGGAG GGSVVTVAFQ ILVSSLPSSK LNAESVATVN GLITTTVEQI KAALNCSAHG HHP
101: NQVQEVSRIP NGSNPGNCIS LLRGLNASQN SMLILQESCT DASGSLVVYS PIDIPAANVV MSGEDPSSIP LLPSGFTILP DGRPGSAAGA STSSAGPLAA
201: ARGGGGGGAG GGSVVTVAFQ ILVSSLPSSK LNAESVATVN GLITTTVEQI KAALNCSAHG HHP
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RSANSSQSNM LILQESCTDP TASFVIYAPV DIVAMNIVLN GGDPDYVALL PSGFAILPDG NANSGAPGGD GGSLLTVAFQ ILVDSVPTAK LSLGSVATVN
701: NLIACTVERI KASMSCETA
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RSANSSQSNM LILQESCTDP TASFVIYAPV DIVAMNIVLN GGDPDYVALL PSGFAILPDG NANSGAPGGD GGSLLTVAFQ ILVDSVPTAK LSLGSVATVN
701: NLIACTVERI KASMSCETA
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.