Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85461 | Canola | cytosol | 92.29 | 96.74 |
| CDY62389 | Canola | cytosol | 48.31 | 73.01 |
| CDY16938 | Canola | nucleus | 64.95 | 72.73 |
| CDY53691 | Canola | nucleus | 66.44 | 69.15 |
| CDY69499 | Canola | cytosol | 27.88 | 67.76 |
| AT1G34650.1 | Thale cress | nucleus | 58.73 | 61.3 |
| AT5G17320.1 | Thale cress | nucleus | 58.73 | 60.45 |
| Os06t0208100-00 | Rice | nucleus | 10.01 | 57.36 |
| CDY42301 | Canola | nucleus | 46.96 | 50.29 |
| CDY67945 | Canola | nucleus | 46.28 | 49.64 |
| CDY43137 | Canola | nucleus | 46.14 | 49.49 |
| CDY44946 | Canola | nucleus | 42.9 | 48.92 |
| CDY49937 | Canola | nucleus | 44.93 | 47.84 |
| CDY21211 | Canola | nucleus | 44.65 | 47.55 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 43.3 | 44.82 |
| Solyc09g066070.2.1 | Tomato | cytosol | 24.22 | 41.53 |
| Solyc09g057530.1.1 | Tomato | cytosol | 7.44 | 40.15 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 37.21 | 40.15 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 37.21 | 40.15 |
| PGSC0003DMT400038820 | Potato | extracellular | 19.76 | 40.11 |
| KRH11810 | Soybean | nucleus | 38.57 | 39.97 |
| Zm00001d018225_P001 | Maize | nucleus | 37.21 | 39.74 |
| PGSC0003DMT400051268 | Potato | cytosol | 26.79 | 39.68 |
| Solyc10g018030.1.1 | Tomato | cytosol | 22.06 | 39.47 |
| CDX96744 | Canola | nucleus | 35.86 | 39.38 |
| KRH36827 | Soybean | nucleus | 37.75 | 39.35 |
| Solyc07g026560.1.1 | Tomato | cytosol | 25.17 | 39.32 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 37.08 | 39.31 |
| Solyc09g057540.2.1 | Tomato | cytosol | 26.39 | 39.24 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 31.93 | 39.14 |
| Zm00001d052133_P001 | Maize | nucleus | 36.94 | 39.11 |
| Zm00001d044973_P001 | Maize | nucleus | 36.4 | 39.04 |
| Solyc09g060130.1.1 | Tomato | cytosol | 23.41 | 38.96 |
| PGSC0003DMT400085057 | Potato | cytosol | 25.17 | 38.91 |
| CDX83884 | Canola | nucleus | 35.99 | 38.83 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 35.72 | 38.77 |
| Zm00001d037140_P004 | Maize | nucleus | 35.99 | 38.72 |
| EES05874 | Sorghum | nucleus | 36.94 | 38.61 |
| EER89393 | Sorghum | nucleus | 36.27 | 38.29 |
| GSMUA_Achr10P... | Banana | nucleus | 35.18 | 38.12 |
| GSMUA_Achr10P... | Banana | nucleus | 36.67 | 38.12 |
| CDY42097 | Canola | nucleus | 26.66 | 38.1 |
| Solyc09g060170.1.1 | Tomato | cytosol | 17.59 | 37.79 |
| CDX68229 | Canola | nucleus | 35.86 | 37.7 |
| CDY26205 | Canola | nucleus | 35.18 | 37.68 |
| CDY26204 | Canola | nucleus | 32.48 | 37.68 |
| Solyc11g011940.1.1 | Tomato | nucleus | 36.54 | 37.66 |
| Solyc09g066050.2.1 | Tomato | cytosol | 28.15 | 37.61 |
| CDY11109 | Canola | nucleus | 36.13 | 37.61 |
| CDY19185 | Canola | nucleus | 34.64 | 37.54 |
| Solyc11g022420.1.1 | Tomato | cytosol | 24.22 | 37.37 |
| KRH36826 | Soybean | nucleus | 35.99 | 37.31 |
| CDX72984 | Canola | nucleus | 35.86 | 37.06 |
| CDX96471 | Canola | nucleus | 35.99 | 37.05 |
| Solyc07g037910.1.1 | Tomato | cytosol | 10.55 | 36.97 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 18.4 | 36.96 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 36.94 | 36.94 |
| PGSC0003DMT400051266 | Potato | cytosol | 19.35 | 36.76 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 36.27 | 36.41 |
| Solyc05g015030.1.1 | Tomato | cytosol | 23.27 | 36.29 |
| Os06t0207966-00 | Rice | plastid | 12.86 | 36.12 |
| Solyc04g025490.1.1 | Tomato | cytosol | 11.77 | 35.95 |
| CDX76399 | Canola | nucleus | 34.78 | 35.94 |
| Solyc09g066030.1.1 | Tomato | nucleus | 35.05 | 35.82 |
| CDY21319 | Canola | nucleus | 34.64 | 35.75 |
| Solyc08g062510.2.1 | Tomato | nucleus | 31.53 | 35.68 |
| CDY27417 | Canola | nucleus | 34.37 | 35.57 |
| CDX90879 | Canola | nucleus | 34.37 | 35.47 |
| Solyc10g018020.1.1 | Tomato | extracellular | 15.83 | 34.82 |
| PGSC0003DMT400036411 | Potato | nucleus | 24.49 | 34.48 |
| CDY06167 | Canola | nucleus | 33.56 | 34.44 |
| CDX98703 | Canola | nucleus | 32.34 | 34.39 |
| CDY66622 | Canola | nucleus | 33.96 | 34.34 |
| CDX94586 | Canola | nucleus | 33.96 | 34.29 |
| CDY16639 | Canola | nucleus | 33.96 | 34.24 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 32.34 | 34.19 |
| CDX94054 | Canola | nucleus | 31.93 | 33.96 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 33.15 | 33.79 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 33.29 | 33.7 |
| CDX79091 | Canola | nucleus | 33.69 | 33.38 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 32.88 | 33.2 |
| CDY00515 | Canola | nucleus | 30.18 | 33.14 |
| CDY31916 | Canola | nucleus | 30.18 | 33.14 |
| Solyc08g062520.2.1 | Tomato | cytosol | 22.87 | 33.07 |
| CDY10041 | Canola | nucleus | 32.88 | 32.53 |
| CDX89415 | Canola | cytosol, mitochondrion | 7.71 | 32.02 |
| Solyc04g025480.1.1 | Tomato | cytosol | 28.28 | 31.91 |
| CDY23096 | Canola | nucleus | 5.68 | 31.82 |
| KRH42428 | Soybean | nucleus | 31.93 | 31.18 |
| CDY48272 | Canola | nucleus | 29.63 | 31.11 |
| CDX74762 | Canola | nucleus | 29.63 | 30.93 |
| CDY12213 | Canola | nucleus | 29.77 | 30.9 |
| CDY18903 | Canola | nucleus | 29.36 | 30.78 |
| CDX67855 | Canola | nucleus | 32.34 | 30.64 |
| CDY49515 | Canola | plasma membrane | 33.56 | 30.58 |
| CDX74347 | Canola | nucleus | 32.75 | 30.52 |
| CDY51143 | Canola | nucleus | 32.61 | 30.51 |
| Solyc07g026570.1.1 | Tomato | nucleus | 5.82 | 30.5 |
| CDY45684 | Canola | nucleus | 32.21 | 30.36 |
| CDX91894 | Canola | nucleus | 32.48 | 30.23 |
| CDY07201 | Canola | nucleus | 32.07 | 30.08 |
| CDY46842 | Canola | nucleus | 33.42 | 29.76 |
| CDY71572 | Canola | nucleus | 15.7 | 29.52 |
| CDY30748 | Canola | endoplasmic reticulum | 23.14 | 29.13 |
| CDY19129 | Canola | nucleus | 28.28 | 28.75 |
| CDX79408 | Canola | nucleus | 29.77 | 28.21 |
| CDY15339 | Canola | nucleus | 27.88 | 28.18 |
| CDX76559 | Canola | nucleus | 27.88 | 28.07 |
| KRH42429 | Soybean | cytosol | 27.6 | 27.95 |
| CDY08866 | Canola | nucleus | 27.6 | 27.72 |
| CDX67929 | Canola | nucleus | 29.36 | 27.71 |
| CDY43458 | Canola | nucleus | 29.91 | 27.22 |
| CDX77711 | Canola | nucleus | 30.18 | 27.1 |
| CDY33492 | Canola | nucleus | 29.09 | 27.01 |
| CDY03177 | Canola | nucleus | 29.63 | 26.51 |
| CDX89416 | Canola | nucleus | 20.57 | 23.42 |
| CDX94443 | Canola | cytosol | 19.49 | 22.93 |
| TraesCSU01G150000.1 | Wheat | nucleus | 6.63 | 22.48 |
| CDY39874 | Canola | plasma membrane | 5.41 | 20.83 |
| TraesCSU01G244000.1 | Wheat | nucleus | 5.41 | 19.42 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 2.3 | 14.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078ET00 | EnsemblPlants:CDY02713 | ProteinID:CDY02713 |
| ProteinID:CDY02713.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00114865001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF504 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf |
| InterPro:START_lipid-bd_dom | UniParc:UPI0004EE9E7B | SEG:seg | : | : | : |
Description
BnaC02g07220D
Coordinates
chrLK031936:+:1043762..1049636
Molecular Weight (calculated)
83380.2 Da
IEP (calculated)
6.538
GRAVY (calculated)
-0.445
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSNHDSSSS YGLETSMSTT NGDNKIYHRH SIHQIQRLEA YFKECPHPDD MQRHKLGEEL KLKPKQIKFW FQNKRTQAKA QSEKVFNASL RAENIRIRRE
101: NEVIQEALKT VTCPPCGGPR PGKEERELYL QKMRAHNAYL KRQLEQISDF VNNNGGHSIP SVNSLASTSS NPHVSYGTSS NPPLEPPSLE REPYTHEHIN
201: NAQPPQHFQP LSQMEKMMMS QTMVNAVTEI IRLIHIEEPM WIKSSIDDRL VIDQENYEKS FTNISHLKSP SARIESSKEV VVVPMDARNL VDMFFDTEKW
301: ARIFSTIVNE AKTIHVLESM DTQRQNFSQL IYEQLHILSP LVPPREFMIL RCCQQIEDDL WVIADISCHH VNIDFESPTC SKRPSGCLIQ ALPNGLSKVT
401: WMEHVEVNEK VRTHRIYRDL LCGGFGYGAR RWTVTLERMC ERLHLSSISV FPTTDLAGVV KTIEGRRSLM NLGERMLKNF AWILKMSGNY DFSQLSETNS
501: SGVRVSVRVN SEAGQPTGLI VCAASSLCLP LSPLEVYNFL TNLEIRHQWD VLCHGYPAAE VAGFATGTDD KNRVNILQTT STTEDADMMI IQDSFRDALG
601: GMVVYAPVDL NTASAAVSGQ VNPSGIPILP SGFIISRDGH HFTSPDLEDG SDYSTSLLTV AFQILVSGPT LSGDLQIEES TTTVNTLITS TLQRIKVMLN
701: CNEESPPHHR LDCSRRKTSR NSAKTPPEQE CEEKPPKTI
101: NEVIQEALKT VTCPPCGGPR PGKEERELYL QKMRAHNAYL KRQLEQISDF VNNNGGHSIP SVNSLASTSS NPHVSYGTSS NPPLEPPSLE REPYTHEHIN
201: NAQPPQHFQP LSQMEKMMMS QTMVNAVTEI IRLIHIEEPM WIKSSIDDRL VIDQENYEKS FTNISHLKSP SARIESSKEV VVVPMDARNL VDMFFDTEKW
301: ARIFSTIVNE AKTIHVLESM DTQRQNFSQL IYEQLHILSP LVPPREFMIL RCCQQIEDDL WVIADISCHH VNIDFESPTC SKRPSGCLIQ ALPNGLSKVT
401: WMEHVEVNEK VRTHRIYRDL LCGGFGYGAR RWTVTLERMC ERLHLSSISV FPTTDLAGVV KTIEGRRSLM NLGERMLKNF AWILKMSGNY DFSQLSETNS
501: SGVRVSVRVN SEAGQPTGLI VCAASSLCLP LSPLEVYNFL TNLEIRHQWD VLCHGYPAAE VAGFATGTDD KNRVNILQTT STTEDADMMI IQDSFRDALG
601: GMVVYAPVDL NTASAAVSGQ VNPSGIPILP SGFIISRDGH HFTSPDLEDG SDYSTSLLTV AFQILVSGPT LSGDLQIEES TTTVNTLITS TLQRIKVMLN
701: CNEESPPHHR LDCSRRKTSR NSAKTPPEQE CEEKPPKTI
001: MDFTRDDNSS DERENDVDAN TNNRHEKKGY HRHTNEQIHR LETYFKECPH PDEFQRRLLG EELNLKPKQI KFWFQNKRTQ AKSHNEKADN AALRAENIKI
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
Arabidopsis Description
HDG9Homeobox-leucine zipper protein HDG9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFI0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.