Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71572 | Canola | nucleus | 30.21 | 14.76 |
| CDY31916 | Canola | nucleus | 47.92 | 13.67 |
| CDY00515 | Canola | nucleus | 47.4 | 13.52 |
| AT5G52170.2 | Thale cress | nucleus | 45.31 | 12.66 |
| PGSC0003DMT400028195 | Potato | nucleus | 25.0 | 12.6 |
| PGSC0003DMT400062468 | Potato | cytosol | 21.35 | 11.48 |
| PGSC0003DMT400042908 | Potato | nucleus | 29.17 | 11.24 |
| PGSC0003DMT400062470 | Potato | cytosol, nucleus, plastid | 17.71 | 11.18 |
| PGSC0003DMT400080861 | Potato | nucleus | 26.56 | 11.11 |
| PGSC0003DMT400028197 | Potato | cytosol | 18.23 | 10.51 |
| VIT_16s0100g00670.t01 | Wine grape | nucleus | 41.67 | 10.22 |
| CDX90879 | Canola | nucleus | 38.02 | 10.2 |
| CDX74762 | Canola | nucleus | 37.5 | 10.17 |
| CDY21319 | Canola | nucleus | 37.5 | 10.06 |
| CDY18903 | Canola | nucleus | 36.46 | 9.93 |
| CDY66622 | Canola | nucleus | 37.5 | 9.85 |
| KRG91457 | Soybean | nucleus | 39.06 | 9.65 |
| CDX79091 | Canola | nucleus | 37.5 | 9.65 |
| CDX76399 | Canola | nucleus | 35.94 | 9.65 |
| CDX94586 | Canola | nucleus | 36.46 | 9.56 |
| CDY16639 | Canola | nucleus | 36.46 | 9.55 |
| KRH35356 | Soybean | nucleus | 38.02 | 9.54 |
| CDX67855 | Canola | nucleus | 38.54 | 9.49 |
| CDX74347 | Canola | nucleus | 39.06 | 9.46 |
| CDY45684 | Canola | nucleus | 38.54 | 9.44 |
| CDY27417 | Canola | nucleus | 34.9 | 9.38 |
| CDX91894 | Canola | nucleus | 38.54 | 9.32 |
| PGSC0003DMT400076898 | Potato | cytosol | 23.96 | 9.29 |
| CDY42097 | Canola | nucleus | 25.0 | 9.28 |
| CDY07201 | Canola | nucleus | 37.5 | 9.14 |
| CDY51143 | Canola | nucleus | 37.5 | 9.11 |
| CDX98703 | Canola | nucleus | 32.81 | 9.06 |
| KRH09109 | Soybean | plastid | 36.46 | 9.03 |
| CDX94054 | Canola | nucleus | 32.29 | 8.92 |
| CDX94443 | Canola | cytosol | 29.17 | 8.92 |
| CDY06167 | Canola | nucleus | 33.33 | 8.89 |
| KRH38560 | Soybean | nucleus | 35.42 | 8.76 |
| PGSC0003DMT400037055 | Potato | nucleus | 36.98 | 8.74 |
| Solyc03g026070.2.1 | Tomato | nucleus | 36.46 | 8.67 |
| CDX89416 | Canola | nucleus | 29.17 | 8.63 |
| CDY48272 | Canola | nucleus | 31.25 | 8.52 |
| CDY15339 | Canola | nucleus | 32.29 | 8.48 |
| CDY10041 | Canola | nucleus | 32.81 | 8.43 |
| CDY12213 | Canola | nucleus | 31.25 | 8.43 |
| PGSC0003DMT400086035 | Potato | nucleus | 28.65 | 8.37 |
| Solyc06g035940.2.1 | Tomato | nucleus | 29.17 | 8.28 |
| CDY30748 | Canola | endoplasmic reticulum | 25.0 | 8.18 |
| CDY26204 | Canola | nucleus | 27.08 | 8.16 |
| CDY19129 | Canola | nucleus | 30.73 | 8.12 |
| CDX72984 | Canola | nucleus | 30.21 | 8.11 |
| CDX68229 | Canola | nucleus | 29.69 | 8.11 |
| CDX96471 | Canola | nucleus | 30.21 | 8.08 |
| CDY11109 | Canola | nucleus | 29.69 | 8.03 |
| CDX96744 | Canola | nucleus | 28.12 | 8.02 |
| CDY19185 | Canola | nucleus | 28.12 | 7.92 |
| CDY33492 | Canola | nucleus | 32.81 | 7.91 |
| CDX76559 | Canola | nucleus | 30.21 | 7.9 |
| CDX83884 | Canola | nucleus | 28.12 | 7.88 |
| CDY26205 | Canola | nucleus | 28.12 | 7.83 |
| CDY49515 | Canola | plasma membrane | 32.81 | 7.77 |
| CDY08866 | Canola | nucleus | 29.69 | 7.74 |
| CDY46842 | Canola | nucleus | 33.33 | 7.71 |
| CDY43458 | Canola | nucleus | 32.29 | 7.64 |
| CDY03177 | Canola | nucleus | 32.81 | 7.63 |
| CDX77711 | Canola | nucleus | 32.29 | 7.53 |
| Solyc06g050160.2.1 | Tomato | nucleus | 25.0 | 7.35 |
| CDX67929 | Canola | nucleus | 27.6 | 6.77 |
| CDY62389 | Canola | cytosol | 17.19 | 6.75 |
| CDX79408 | Canola | nucleus | 27.08 | 6.67 |
| PGSC0003DMT400076902 | Potato | nucleus | 20.83 | 5.97 |
| CDY16938 | Canola | nucleus | 20.31 | 5.91 |
| CDX85461 | Canola | cytosol | 20.83 | 5.67 |
| CDY53691 | Canola | nucleus | 20.83 | 5.63 |
| CDY02713 | Canola | nucleus | 20.83 | 5.41 |
| CDY21211 | Canola | nucleus | 19.27 | 5.33 |
| CDY49937 | Canola | nucleus | 19.27 | 5.33 |
| PGSC0003DMT400092271 | Potato | nucleus | 7.29 | 5.28 |
| CDY67945 | Canola | nucleus | 18.23 | 5.08 |
| CDY43137 | Canola | nucleus | 18.23 | 5.08 |
| CDY44946 | Canola | nucleus | 16.67 | 4.94 |
| CDY42301 | Canola | nucleus | 17.71 | 4.93 |
| CDY23096 | Canola | nucleus | 2.6 | 3.79 |
| CDY69499 | Canola | cytosol | 2.08 | 1.32 |
| CDX89415 | Canola | cytosol, mitochondrion | 1.04 | 1.12 |
Protein Annotations
| EnsemblPlants:CDY39874 | EnsemblPlantsGene:GSBRNA2T00068705001 | GO:A0A078HRE3 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002913 | InterPro:START_lipid-bd_dom | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF350 | PFAM:PF01852 | PFscan:PS50848 | ProteinID:CDY39874 | ProteinID:CDY39874.1 | SEG:seg |
| SUPFAM:SSF55961 | TMHMM:TMhelix | UniParc:UPI0004EDE727 | UniProt:A0A078HRE3 | MapMan:15.5.3.3 | : |
Description
BnaC03g67430DBnaC03g67430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRE3]
Coordinates
chrLK032459:-:24399..25966
Molecular Weight (calculated)
21440.2 Da
IEP (calculated)
8.378
GRAVY (calculated)
0.176
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHIAPLCYV YGDLRLARLF MAEIESHGRF YSSDRCTSKY SWWRLFIVAG AAAIAVSVLV IGHAADIGWA CRDGEGKGMI KPEGDCGVGF VVLVLLLLGF
101: LQNRWAEMFE CIVAAASTVE VISNGSGGSR NGSLQLMQAE FQVMSPLFPI RQVKFLRYCK QHGDGLWAVV DISYDVNREK ASLRMHHTRH RQ
101: LQNRWAEMFE CIVAAASTVE VISNGSGGSR NGSLQLMQAE FQVMSPLFPI RQVKFLRYCK QHGDGLWAVV DISYDVNREK ASLRMHHTRH RQ
001: MNGDLEVDMS RGDFNPSFFL GKLKDDEFES RSLSDDSFDA MSGDEDKQEQ RPKKKKRKTK YHRHTSYQIQ ELESFFKECP HPNEKQRLEL GKKLTLESKQ
101: IKFWFQNRRT QMKTQLERHE NVILKQENEK LRLENSFLKE SMRGSLCIDC GGAVIPGEVS FEQHQLRIEN AKLKEELDRI CALANRFIGG SISLEQPSNG
201: GIGSQHLPIG HCVSGGTSLM FMDLAMEAMD ELLKLAELET SLWSSKSEKG SMNHFPGSRE TGLVLINSLA LVETLMDTNK WAEMFECIVA VASTLEVISN
301: GSDGSRNGSI LLMQAEFQVM SPLVPIKQKK FLRYCKQHGD GLWAVVDVSY DINRGNENLK SYGGSKMFPS GCIIQDIGNG CSKVTWIEHS EYEESHTHSL
401: YQPLLSSSVG LGATKWLATL QRQCESFTML LSSEDHTGLS HAGTKSILKL AQRMKLNFYS GITASCIHKW EKLLAENVGQ DTRILTRKSL EPSGIVLSAA
501: TSLWLPVTQQ RLFEFLCDGK CRNQWDILSN GASMENTLLV PKGQQEGSCV SLLRAAGNDQ NESSMLILQE TWNDVSGALV VYAPVDIPSM NTVMSGGDSA
601: YVALLPSGFS ILPDGSSSSS DQFDTDGGLV NQESKGCLLT VGFQILVNSL PTAKLNVESV ETVNNLIACT IHKIRAALRI PA
101: IKFWFQNRRT QMKTQLERHE NVILKQENEK LRLENSFLKE SMRGSLCIDC GGAVIPGEVS FEQHQLRIEN AKLKEELDRI CALANRFIGG SISLEQPSNG
201: GIGSQHLPIG HCVSGGTSLM FMDLAMEAMD ELLKLAELET SLWSSKSEKG SMNHFPGSRE TGLVLINSLA LVETLMDTNK WAEMFECIVA VASTLEVISN
301: GSDGSRNGSI LLMQAEFQVM SPLVPIKQKK FLRYCKQHGD GLWAVVDVSY DINRGNENLK SYGGSKMFPS GCIIQDIGNG CSKVTWIEHS EYEESHTHSL
401: YQPLLSSSVG LGATKWLATL QRQCESFTML LSSEDHTGLS HAGTKSILKL AQRMKLNFYS GITASCIHKW EKLLAENVGQ DTRILTRKSL EPSGIVLSAA
501: TSLWLPVTQQ RLFEFLCDGK CRNQWDILSN GASMENTLLV PKGQQEGSCV SLLRAAGNDQ NESSMLILQE TWNDVSGALV VYAPVDIPSM NTVMSGGDSA
601: YVALLPSGFS ILPDGSSSSS DQFDTDGGLV NQESKGCLLT VGFQILVNSL PTAKLNVESV ETVNNLIACT IHKIRAALRI PA
Arabidopsis Description
HDG7homeodomain GLABROUS 7 [Source:TAIR;Acc:AT5G52170]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.