Factsheet for Solyc03g026070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037055	Potato	nucleus	90.83	90.27
KRH35356	Soybean	nucleus	48.33	50.98
KRG91457	Soybean	nucleus	48.7	50.58
Solyc01g091630.2.1	Tomato	nucleus	51.05	50.18
KRH38560	Soybean	nucleus	46.59	48.45
KRH09109	Soybean	plastid	45.72	47.61
CDY00515	Canola	nucleus	38.17	45.77
CDY31916	Canola	nucleus	38.17	45.77
Solyc10g005330.2.1	Tomato	nucleus	40.15	45.51
Bra028295.1-P	Field mustard	nucleus	38.41	45.45
Solyc06g050160.2.1	Tomato	nucleus	34.94	43.19
Solyc03g031760.2.1	Tomato	cytosol	33.09	42.45
Solyc06g035940.2.1	Tomato	nucleus	35.44	42.31
Solyc02g080260.2.1	Tomato	nucleus	39.16	42.08
VIT_13s0067g01580.t01	Wine grape	nucleus	5.58	40.18
Solyc03g098200.2.1	Tomato	nucleus	35.07	39.25
Solyc04g025740.1.1	Tomato	nucleus	7.06	38.51
Solyc06g072310.2.1	Tomato	nucleus	34.08	38.35
Solyc12g005830.1.1	Tomato	nucleus	35.07	37.68
CDY39874	Canola	plasma membrane	8.67	36.46
Solyc07g041850.1.1	Tomato	nucleus	30.11	35.74
CDX89415	Canola	cytosol, mitochondrion	7.81	35.39
Solyc08g076370.2.1	Tomato	nucleus	36.56	35.04
Solyc03g120620.2.1	Tomato	nucleus	33.46	34.84
Solyc07g026570.1.1	Tomato	nucleus	6.07	34.75
Bra013898.1-P	Field mustard	nucleus	24.91	32.26
Solyc09g057530.1.1	Tomato	cytosol	5.45	32.12
CDX89416	Canola	nucleus	25.53	31.74
CDX94443	Canola	cytosol	24.29	31.21
Solyc11g011940.1.1	Tomato	nucleus	27.01	30.4
Solyc08g062510.2.1	Tomato	nucleus	23.79	29.4
Solyc09g066030.1.1	Tomato	nucleus	26.15	29.18
Solyc04g025490.1.1	Tomato	cytosol	8.67	28.93
Solyc09g060140.2.1	Tomato	mitochondrion	13.14	28.8
Solyc11g022430.1.1	Tomato	cytosol	6.32	28.49
Solyc11g022410.1.1	Tomato	extracellular	2.6	28.38
Solyc09g057540.2.1	Tomato	cytosol	17.35	28.17
Solyc09g066070.2.1	Tomato	cytosol	14.99	28.07
Solyc10g018000.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus	24.29	28.04
Solyc10g006420.2.1	Tomato	cytosol	17.97	27.51
Solyc05g015030.1.1	Tomato	cytosol	16.11	27.43
Solyc10g018030.1.1	Tomato	cytosol	14.0	27.36
AT5G07260.1	Thale cress	cytosol	18.22	27.17
Solyc09g066050.2.1	Tomato	cytosol	18.59	27.12
Solyc09g060130.1.1	Tomato	cytosol	14.87	27.03
Solyc07g037910.1.1	Tomato	cytosol	7.06	27.01
Solyc07g026560.1.1	Tomato	cytosol	15.49	26.43
Solyc04g025480.1.1	Tomato	cytosol	21.44	26.41
Solyc08g062520.2.1	Tomato	cytosol	16.48	26.03
Solyc11g022420.1.1	Tomato	cytosol	15.24	25.68
Solyc09g060170.1.1	Tomato	cytosol	10.78	25.29
Solyc10g018020.1.1	Tomato	extracellular	10.16	24.4
AT4G26920.1	Thale cress	cytosol, plasma membrane, plastid	13.01	22.78

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289
InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	UniProt:K4BF80	PFAM:PF00046
PFAM:PF01852	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF350	SMART:SM00234
SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom	EnsemblPlantsGene:Solyc03g026070.2	EnsemblPlants:Solyc03g026070.2.1
UniParc:UPI0002769090	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:-:3475636..3480091

Molecular Weight (calculated)

87928.8 Da

IEP (calculated)

6.469

GRAVY (calculated)

-0.251

Length

807 amino acids

Sequence
(BLAST)

001: MSFGGFIGSS SGGNGGGVSR LVGDTSYEAM PTATMAQSQL ITSSLSHSMF NSSPLSLALK PKMEGSGDLS FDGMGRNSRD DEYESRSGTG SDNFDGVGSG
101: DEIETHIGSS SKSAKKYHRH TPYQIQELEA FFKESPHPDE KARLELGKRL TLESRQVKFW FQNRRTQMKT QMERHENSML KQENDKLRIE NIAMKEAMRS
201: PACPHCGGQA ILGEIHIEEH HLKIENARLR DEYSRICVVA NKFLGRQVES VHGPMSAGMA NSGLELAVGR NGYGAMNSVD TALPMGLNFG NNFSSALPAI
301: SPRPALSMAG VDVSFDRNML MELAFASMNE LIKLADIGAP LWLGNFDGTA EVLNLEEYAR SFPPCIGIKP AHFTAEATKA TGTVMINSLT LVETLMDTSR
401: WMDIFSCIVG KTSTINVISN SSGGSKDGNM QLIQAEFQVP SALVPVRRVK FLRFCKQHAE GVWVMVDVSI DAIQEGPVPL DGSCRRLPSG CIVQELPNGC
501: SKVIWIEHME YDESVTHNYY HPYIRSGLGF GAQRWIATLQ RQCEFITVMS SPVPSGDNSV LSSSGRRSIA MLARRVTRHF CNGVCATYYK WESIQLGTAE
601: ESKFIMRKGV GEPGDLNGMV LSASRTLWLP ITHERLSDFL RNEQTRGQWD VLSQGGSVHR IVHIAKGQDP GNSITLFRTT VANSDGSQNG LLTLQESCTD
701: VSGSIIAYTS LNTGDMNGVM NGGDSSCVTF LPSGFAMVPD CYENSNGVAG IGTLENGGKM NGCLLTMGYQ VLMSNPPTGN LTMDSVNTVD SLITRTVHNI
801: KLAFQCN

Best Arabidopsis Sequence Match ( AT4G00730.1 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTSI TPGGRKSMLK LAQRMTFNFC SGISAPSVHN WSKLTVGNVD
601: PDVRVMTRKS VDDPGEPPGI VLSAATSVWL PAAPQRLYDF LRNERMRCEW DILSNGGPMQ EMAHITKGQD QGVSLLRSNA MNANQSSMLI LQETCIDASG
701: ALVVYAPVDI PAMHVVMNGG DSSYVALLPS GFAVLPDGGI DGGGSGDGDQ RPVGGGSLLT VAFQILVNNL PTAKLTVESV ETVNNLISCT VQKIRAALQC
801: ES

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.