Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005277 | Potato | nucleus | 94.14 | 96.45 |
| Solyc03g031760.2.1 | Tomato | cytosol | 66.18 | 79.01 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 75.9 | 78.51 |
| Solyc10g005330.2.1 | Tomato | nucleus | 73.1 | 77.11 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 65.91 | 75.0 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 57.52 | 73.72 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 67.11 | 69.42 |
| EES11464 | Sorghum | nucleus | 70.97 | 67.55 |
| GSMUA_Achr10P... | Banana | nucleus | 63.52 | 66.71 |
| EES13460 | Sorghum | mitochondrion, nucleus | 68.04 | 65.43 |
| Os08t0136100-01 | Rice | nucleus | 68.04 | 65.1 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 67.11 | 64.95 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 66.98 | 64.9 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 67.11 | 64.86 |
| Zm00001d002234_P003 | Maize | nucleus | 68.58 | 64.86 |
| Zm00001d049443_P005 | Maize | nucleus | 67.91 | 64.07 |
| GSMUA_Achr11P... | Banana | plastid | 67.24 | 64.01 |
| Zm00001d026351_P003 | Maize | nucleus | 70.31 | 62.56 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 65.78 | 62.06 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 65.78 | 62.06 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 65.65 | 61.78 |
| Zm00001d000247_P001 | Maize | plasma membrane | 58.46 | 61.06 |
| Zm00001d024701_P001 | Maize | nucleus | 64.71 | 60.98 |
| EES14500 | Sorghum | nucleus | 65.51 | 60.44 |
| Solyc12g005830.1.1 | Tomato | nucleus | 53.13 | 53.13 |
| Solyc01g091630.2.1 | Tomato | nucleus | 53.93 | 49.33 |
| Solyc03g098200.2.1 | Tomato | nucleus | 45.54 | 47.43 |
| Solyc07g041850.1.1 | Tomato | nucleus | 41.81 | 46.18 |
| Solyc06g072310.2.1 | Tomato | nucleus | 43.94 | 46.03 |
| Os08t0187500-01 | Rice | nucleus | 18.64 | 42.94 |
| Solyc03g120620.2.1 | Tomato | nucleus | 42.61 | 41.29 |
| Solyc08g076370.2.1 | Tomato | nucleus | 44.61 | 39.79 |
| Solyc03g026070.2.1 | Tomato | nucleus | 42.08 | 39.16 |
| Solyc10g006420.2.1 | Tomato | cytosol | 26.76 | 38.14 |
| Solyc06g035940.2.1 | Tomato | nucleus | 33.69 | 37.43 |
| Solyc04g025740.1.1 | Tomato | nucleus | 7.19 | 36.49 |
| Solyc06g050160.2.1 | Tomato | nucleus | 31.03 | 35.68 |
| Solyc07g026570.1.1 | Tomato | nucleus | 6.66 | 35.46 |
| Solyc11g022410.1.1 | Tomato | extracellular | 3.46 | 35.14 |
| Solyc09g057530.1.1 | Tomato | cytosol | 6.39 | 35.04 |
| Solyc09g066070.2.1 | Tomato | cytosol | 19.84 | 34.57 |
| Solyc04g025490.1.1 | Tomato | cytosol | 10.92 | 33.88 |
| Solyc09g060170.1.1 | Tomato | cytosol | 15.31 | 33.43 |
| Solyc09g057540.2.1 | Tomato | cytosol | 21.97 | 33.2 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 16.11 | 32.88 |
| Solyc11g011940.1.1 | Tomato | nucleus | 31.03 | 32.5 |
| Solyc10g018030.1.1 | Tomato | cytosol | 17.71 | 32.2 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 29.96 | 32.19 |
| Solyc11g022430.1.1 | Tomato | cytosol | 7.59 | 31.84 |
| Solyc09g066030.1.1 | Tomato | nucleus | 30.63 | 31.81 |
| Solyc09g060130.1.1 | Tomato | cytosol | 18.64 | 31.53 |
| Solyc09g066050.2.1 | Tomato | cytosol | 22.9 | 31.1 |
| Solyc08g062510.2.1 | Tomato | nucleus | 26.9 | 30.93 |
| Solyc11g022420.1.1 | Tomato | cytosol | 19.57 | 30.69 |
| Solyc07g026560.1.1 | Tomato | cytosol | 19.31 | 30.66 |
| Solyc10g018020.1.1 | Tomato | extracellular | 13.71 | 30.65 |
| Solyc04g025480.1.1 | Tomato | cytosol | 25.83 | 29.62 |
| Solyc05g015030.1.1 | Tomato | cytosol | 18.64 | 29.54 |
| Solyc08g062520.2.1 | Tomato | cytosol | 18.77 | 27.59 |
| Solyc07g037910.1.1 | Tomato | cytosol | 7.59 | 27.01 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | UniProt:K4B9P7 | PFAM:PF00046 |
| PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF320 | SMART:SM00234 |
| SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:Solyc02g080260.2 | EnsemblPlants:Solyc02g080260.2.1 |
| UniParc:UPI0002768E2D | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:44532858..44536817
Molecular Weight (calculated)
82226.6 Da
IEP (calculated)
5.277
GRAVY (calculated)
-0.330
Length
751 amino acids
Sequence
(BLAST)
(BLAST)
001: MFNNHQHLLD ISSSAQRTPD NELDFIRDEE FDSNSGADNM EAPNSGDDDQ ADPNQPPNKK KRYHRHTQNQ IQEMESFYKE CNHPDDKQRK ELGRRLGLEP
101: LQVKFWFQNK RTQMKAQHER CENTQLRNEN EKLRAENIRY KEALSNAACP NCGGPAAIGE MSFDEHQLRI ENARLRDEID RITGIAGKYV GKSALGYSHQ
201: LPLPQPEAPR VLDLAFGPQS GLLGEMYAAG DLLRTAVTGL TDAEKPVVIE LAVTAMEELI RMAQTEEPLW LPSSGSETLC EQEYARIFPR GLGPKPATLN
301: SEASRESAVV IMNHINLVEI LMDVNQWTTV FAGLVSKAMT LEVLSTGVAG NHNGALQVMT AEFQVPSPLV PTRENYFLRY CKQHGEGTWV VVDVSLDNLR
401: TVSVPRCRRR PSGCLIQEMP NGYSRVIWVE HVEVDENAVH DIYKPLVNSG IAFGAKRWVA TLDRQCERLA SVLALNIPTG DVGIITSPAG RKSMLKLAER
501: MVMSFCAGVG ASTTHIWTTL SGSGADDVRV MTRKSIDDPG RPPGIVLSAA TSFWLPVSPK RVFDFLRDEN SRNEWDILSN GGIVQEMAHI ANGRDPGNCV
601: SLLRVNTGTN SNQSNMLILQ ESTTDVTGSY VIYAPVDIAA MNVVLGGGDP DYVALLPSGF AILPDGPMNY HGGGNSEIDS PGGSLLTVAF QILVDSVPTA
701: KLSLGSVATV NSLIKCTVEK IKGAVTSANA AGGLGWGRVE RSYKLDEGEG S
101: LQVKFWFQNK RTQMKAQHER CENTQLRNEN EKLRAENIRY KEALSNAACP NCGGPAAIGE MSFDEHQLRI ENARLRDEID RITGIAGKYV GKSALGYSHQ
201: LPLPQPEAPR VLDLAFGPQS GLLGEMYAAG DLLRTAVTGL TDAEKPVVIE LAVTAMEELI RMAQTEEPLW LPSSGSETLC EQEYARIFPR GLGPKPATLN
301: SEASRESAVV IMNHINLVEI LMDVNQWTTV FAGLVSKAMT LEVLSTGVAG NHNGALQVMT AEFQVPSPLV PTRENYFLRY CKQHGEGTWV VVDVSLDNLR
401: TVSVPRCRRR PSGCLIQEMP NGYSRVIWVE HVEVDENAVH DIYKPLVNSG IAFGAKRWVA TLDRQCERLA SVLALNIPTG DVGIITSPAG RKSMLKLAER
501: MVMSFCAGVG ASTTHIWTTL SGSGADDVRV MTRKSIDDPG RPPGIVLSAA TSFWLPVSPK RVFDFLRDEN SRNEWDILSN GGIVQEMAHI ANGRDPGNCV
601: SLLRVNTGTN SNQSNMLILQ ESTTDVTGSY VIYAPVDIAA MNVVLGGGDP DYVALLPSGF AILPDGPMNY HGGGNSEIDS PGGSLLTVAF QILVDSVPTA
701: KLSLGSVATV NSLIKCTVEK IKGAVTSANA AGGLGWGRVE RSYKLDEGEG S
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.