Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G473700.1 | Wheat | nucleus | 99.49 | 99.61 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 99.23 | 99.48 |
| HORVU2Hr1G106970.2 | Barley | nucleus, plastid | 98.84 | 98.84 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 62.29 | 82.59 |
| EES11464 | Sorghum | nucleus | 83.27 | 82.0 |
| Zm00001d002234_P003 | Maize | nucleus | 81.08 | 79.35 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 65.77 | 77.42 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 71.43 | 76.45 |
| Zm00001d026351_P003 | Maize | nucleus | 82.24 | 75.71 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 68.98 | 73.83 |
| PGSC0003DMT400061859 | Potato | nucleus | 65.12 | 73.44 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 71.04 | 72.92 |
| GSMUA_Achr10P... | Banana | nucleus | 66.28 | 72.03 |
| Solyc03g031760.2.1 | Tomato | cytosol | 58.17 | 71.86 |
| KRH13175 | Soybean | cytosol | 16.34 | 71.75 |
| KRH56105 | Soybean | nucleus | 66.92 | 71.33 |
| Bra000807.1-P | Field mustard | nucleus | 54.7 | 71.19 |
| PGSC0003DMT400029291 | Potato | nucleus | 63.84 | 71.16 |
| CDX90879 | Canola | nucleus | 65.51 | 71.09 |
| GSMUA_Achr11P... | Banana | plastid | 72.07 | 70.98 |
| CDY21319 | Canola | nucleus | 65.38 | 70.95 |
| Solyc10g005330.2.1 | Tomato | nucleus | 64.99 | 70.93 |
| KRH25398 | Soybean | plastid | 68.98 | 70.43 |
| CDY27417 | Canola | nucleus | 64.48 | 70.17 |
| CDX98703 | Canola | nucleus | 62.55 | 69.93 |
| CDX94054 | Canola | nucleus | 62.42 | 69.78 |
| CDX76399 | Canola | nucleus | 64.09 | 69.65 |
| CDY06167 | Canola | nucleus | 64.48 | 69.58 |
| CDY16639 | Canola | nucleus | 65.64 | 69.58 |
| Bra032478.1-P | Field mustard | nucleus | 64.35 | 69.54 |
| AT1G05230.5 | Thale cress | nucleus | 64.48 | 69.49 |
| CDX94586 | Canola | nucleus | 65.38 | 69.4 |
| KRH27601 | Soybean | nucleus | 65.12 | 69.13 |
| KRH22554 | Soybean | nucleus | 69.37 | 69.01 |
| Bra015401.1-P | Field mustard | nucleus | 63.84 | 68.89 |
| KRH26803 | Soybean | nucleus | 69.24 | 68.89 |
| Bra029527.1-P | Field mustard | nucleus | 66.02 | 68.86 |
| KRH77881 | Soybean | nucleus | 64.61 | 68.67 |
| AT4G04890.1 | Thale cress | nucleus | 65.64 | 68.64 |
| PGSC0003DMT400005277 | Potato | nucleus | 64.61 | 68.49 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 69.63 | 67.96 |
| AT4G21750.3 | Thale cress | nucleus | 66.41 | 67.72 |
| CDY66622 | Canola | nucleus | 63.45 | 67.44 |
| CDY10041 | Canola | nucleus | 64.61 | 67.2 |
| Solyc02g080260.2.1 | Tomato | nucleus | 64.86 | 67.11 |
| Bra038757.1-P | Field mustard | nucleus | 62.42 | 66.9 |
| CDX79091 | Canola | nucleus | 63.96 | 66.62 |
| Bra020872.1-P | Field mustard | nucleus | 63.71 | 66.18 |
| Bra013556.1-P | Field mustard | nucleus | 57.66 | 64.93 |
| CDY49515 | Canola | plasma membrane | 64.61 | 61.9 |
| CDY71572 | Canola | nucleus | 31.15 | 61.58 |
| CDY46842 | Canola | nucleus | 64.48 | 60.36 |
| CDY23096 | Canola | nucleus | 10.17 | 59.85 |
| KRG91238 | Soybean | nucleus | 54.18 | 57.59 |
| KRH35579 | Soybean | nucleus | 54.05 | 53.98 |
| TraesCS6A01G255800.1 | Wheat | nucleus | 49.16 | 47.51 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 41.06 | 46.57 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 13.77 | 45.15 |
| TraesCS5A01G314400.2 | Wheat | nucleus | 46.98 | 42.99 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 39.0 | 41.79 |
| TraesCS7A01G168100.1 | Wheat | nucleus | 7.85 | 41.5 |
| TraesCS2A01G401200.3 | Wheat | nucleus | 41.44 | 40.25 |
| TraesCS7A01G168000.1 | Wheat | nucleus | 6.69 | 38.24 |
| PGSC0003DMT400037397 | Potato | cytosol | 24.07 | 38.09 |
| TraesCS3A01G305300.1 | Wheat | nucleus | 37.19 | 37.98 |
| TraesCS1A01G193400.1 | Wheat | nucleus, plastid | 42.6 | 37.92 |
| KRH22254 | Soybean | cytosol | 26.0 | 37.76 |
| Solyc10g006420.2.1 | Tomato | cytosol | 24.71 | 36.43 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 14.8 | 34.85 |
| TraesCS3A01G325800.1 | Wheat | nucleus | 27.8 | 31.63 |
| TraesCS4A01G072000.1 | Wheat | nucleus | 8.75 | 30.49 |
| TraesCS7A01G215300.1 | Wheat | nucleus | 6.31 | 28.66 |
| TraesCS5A01G330200.1 | Wheat | nucleus | 27.28 | 28.49 |
| TraesCS4A01G231300.2 | Wheat | nucleus | 28.06 | 28.24 |
| TraesCS3A01G119200.1 | Wheat | nucleus | 6.44 | 27.62 |
| TraesCS7A01G215400.1 | Wheat | nucleus | 6.31 | 27.37 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF349 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:TraesCS2A01G474000 | EnsemblPlants:TraesCS2A01G474000.1 | TIGR:cd00086 | TIGR:cd08875 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:715337511..715343047
Molecular Weight (calculated)
83529.1 Da
IEP (calculated)
5.735
GRAVY (calculated)
-0.223
Length
777 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIPARHMPS SMIGRSSGGA PYGSSSALSL GQPNLLDGSN QHLLPHHLLE QIPARAAESG DNNNGSVGGG VGMIRGRDSI DPLGDEFESR SGSENVDGDA
101: VDNAEQDQDP NQRPRKKRYH RHTQHQIQEM EAFFKECPHP DDKQRKELSR ELGLEPLQVK FWFQNKRTQM KNQHERHENS QLRADNDKLR AENMRYKEAL
201: SSASCPNCGG PAALGEMSFD EHHLRVENAR LRDEIDRISA IAAKYVGKPM VPFPVLSSPL AAAPGASAYD VFAGAASVLQ APPDDKQQGV VVELAVAAME
301: ELLRMARLDD PLWATTVDQA LALDEEEYAR MFIDPRGGLG PKQYGLVSEA SRDAAVVIMT PASLVEILMD VNQYAAVFSS IVSRAATLEV LSTGVAGCYD
401: GALQVMSVEF QVPSPLVPTR ESYFVRYCKR NADGAWAVVD VSLDGLQGVK CRRRPSGCLI QEAPNGYSKV TWVEHVEVDD RSVHNIYKPL VGSGLAFGAR
501: RWVGVLGRQC ERLASAMASN IPTSDIGVIT SSEGRKSMLK LAERMVASFC GGVTASVAHQ WTTLSGSGAE DVRVMTRKSV DDPGRPPGIV LNAATSFWLP
601: VPPKRVFDFL RDETSRSEWD ILSNGGIVQE MAHIANGRDH GNCVSLLRVN STNSNQSNML ILQESCTDAS GSYVIYAPVD VVAMNVVLNG GDTDYVALLP
701: SGFAILPDGP AGTMHAAAGA TGTGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIACTV ERIKTAVISN GGASPPQ
101: VDNAEQDQDP NQRPRKKRYH RHTQHQIQEM EAFFKECPHP DDKQRKELSR ELGLEPLQVK FWFQNKRTQM KNQHERHENS QLRADNDKLR AENMRYKEAL
201: SSASCPNCGG PAALGEMSFD EHHLRVENAR LRDEIDRISA IAAKYVGKPM VPFPVLSSPL AAAPGASAYD VFAGAASVLQ APPDDKQQGV VVELAVAAME
301: ELLRMARLDD PLWATTVDQA LALDEEEYAR MFIDPRGGLG PKQYGLVSEA SRDAAVVIMT PASLVEILMD VNQYAAVFSS IVSRAATLEV LSTGVAGCYD
401: GALQVMSVEF QVPSPLVPTR ESYFVRYCKR NADGAWAVVD VSLDGLQGVK CRRRPSGCLI QEAPNGYSKV TWVEHVEVDD RSVHNIYKPL VGSGLAFGAR
501: RWVGVLGRQC ERLASAMASN IPTSDIGVIT SSEGRKSMLK LAERMVASFC GGVTASVAHQ WTTLSGSGAE DVRVMTRKSV DDPGRPPGIV LNAATSFWLP
601: VPPKRVFDFL RDETSRSEWD ILSNGGIVQE MAHIANGRDH GNCVSLLRVN STNSNQSNML ILQESCTDAS GSYVIYAPVD VVAMNVVLNG GDTDYVALLP
701: SGFAILPDGP AGTMHAAAGA TGTGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIACTV ERIKTAVISN GGASPPQ
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.