Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g006420.2.1 | Tomato | cytosol | 93.48 | 87.1 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 40.33 | 33.79 |
| KRH22254 | Soybean | cytosol | 34.22 | 31.4 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 41.55 | 30.91 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 14.66 | 30.38 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 20.16 | 30.0 |
| PGSC0003DMT400061859 | Potato | nucleus | 39.92 | 28.45 |
| PGSC0003DMT400085057 | Potato | cytosol | 27.49 | 28.24 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 41.55 | 28.1 |
| PGSC0003DMT400029291 | Potato | nucleus | 39.51 | 27.83 |
| PGSC0003DMT400048971 | Potato | nucleus | 31.77 | 27.46 |
| PGSC0003DMT400038820 | Potato | extracellular | 19.96 | 26.92 |
| PGSC0003DMT400005277 | Potato | nucleus | 39.51 | 26.47 |
| PGSC0003DMT400051268 | Potato | cytosol | 26.07 | 25.65 |
| PGSC0003DMT400076898 | Potato | cytosol | 25.25 | 25.05 |
| GSMUA_Achr10P... | Banana | nucleus | 36.46 | 25.04 |
| EES11464 | Sorghum | nucleus | 40.12 | 24.97 |
| GSMUA_Achr11P... | Banana | plastid | 39.51 | 24.59 |
| PGSC0003DMT400094124 | Potato | nucleus | 37.68 | 24.47 |
| EES13460 | Sorghum | mitochondrion, nucleus | 38.7 | 24.33 |
| Zm00001d002234_P003 | Maize | nucleus | 39.1 | 24.18 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 38.09 | 24.1 |
| Os08t0136100-01 | Rice | nucleus | 38.49 | 24.08 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 38.09 | 24.07 |
| PGSC0003DMT400062470 | Potato | cytosol, nucleus, plastid | 14.87 | 24.01 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 37.88 | 24.0 |
| Zm00001d049443_P005 | Maize | nucleus | 38.29 | 23.62 |
| Zm00001d024701_P001 | Maize | nucleus | 38.29 | 23.59 |
| Zm00001d026351_P003 | Maize | nucleus | 40.53 | 23.58 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 38.09 | 23.43 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 37.88 | 23.37 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 37.68 | 23.24 |
| EES14500 | Sorghum | nucleus | 38.49 | 23.22 |
| PGSC0003DMT400051266 | Potato | cytosol | 17.92 | 22.62 |
| Zm00001d000247_P001 | Maize | plasma membrane | 32.79 | 22.39 |
| PGSC0003DMT400036411 | Potato | nucleus | 23.42 | 21.9 |
| PGSC0003DMT400069312 | Potato | nucleus | 31.57 | 21.68 |
| PGSC0003DMT400033830 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 14.87 | 20.74 |
| PGSC0003DMT400062468 | Potato | cytosol | 15.07 | 20.73 |
| PGSC0003DMT400095083 | Potato | cytosol | 4.89 | 19.83 |
| PGSC0003DMT400028197 | Potato | cytosol | 13.44 | 19.82 |
| PGSC0003DMT400006155 | Potato | nucleus | 30.75 | 19.76 |
| PGSC0003DMT400071377 | Potato | nucleus | 32.99 | 19.73 |
| PGSC0003DMT400095329 | Potato | cytosol | 10.79 | 19.2 |
| PGSC0003DMT400006770 | Potato | nucleus | 29.94 | 19.04 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 26.27 | 18.94 |
| PGSC0003DMT400019986 | Potato | nucleus | 30.55 | 18.54 |
| PGSC0003DMT400086035 | Potato | nucleus | 23.01 | 17.2 |
| PGSC0003DMT400037055 | Potato | nucleus | 27.7 | 16.75 |
| PGSC0003DMT400042908 | Potato | nucleus | 16.9 | 16.67 |
| PGSC0003DMT400076902 | Potato | nucleus | 21.79 | 15.97 |
| PGSC0003DMT400080861 | Potato | nucleus | 13.85 | 14.81 |
| PGSC0003DMT400028195 | Potato | nucleus | 9.98 | 12.86 |
| PGSC0003DMT400092271 | Potato | nucleus | 4.28 | 7.92 |
| Os08t0187500-01 | Rice | nucleus | 2.65 | 3.99 |
| HORVU3Hr1G022160.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400037397 | EnsemblPlantsGene:PGSC0003DMG400014427 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 | InterPro:IPR002913 |
| InterPro:START_lipid-bd_dom | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF507 | PFAM:PF01852 | PFscan:PS50848 | PGSC:PGSC0003DMG400014427 |
| SMART:SM00234 | SUPFAM:SSF55961 | UniParc:UPI0002960AC9 | UniProt:M1B5B7 | MapMan:15.5.3.3 | : |
Description
Homeobox protein [Source:PGSC_GENE;Acc:PGSC0003DMG400014427]
Coordinates
chr10:-:1330213..1334789
Molecular Weight (calculated)
55060.3 Da
IEP (calculated)
5.904
GRAVY (calculated)
-0.124
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQQQEPLWQ FDTNKQTEVL NEVEYKRRFA HLDPTLEEII KFIANGGPID MPNFNGNVDI EMGNSSIPSV IEASRAIGIV LVDPINLVHM LMDVDKWSCV
101: FSNIVSKATN LGLLLTGRDG NLNGALQVMS AQFHLPSPLV RPREVYFARY SRQLDFKTWL VADVSLESVY PNPLVQYKRR PSGCLIHGLQ SGLSLVTWVE
201: NNVVCDGSIP EMFRQTFKSG VAFSAKRWML TMERHYDRYA VLQKQQNQLL GQPLLDNNVR KGQKNLMKLA ERTIKSYNTI FSSCNENQWM PLSIHGGEDI
301: FVKTNMNLDA PGTPRGVVVM ISTSVWLPIP QNDVFKFLRA GGNRWKWDLL SYGCMTRDAL HIPSARDPAN SVSLVIVEPP NGRTNKSEMF YLQESFTDST
401: GMYIIFAPVD ASAVQYIMEG KDSDSVDMLA SGFAVLPCTS EGSILTMAFQ LMDEEISTPE YLPPHSVSTA NRLVSETVSL IKASLMFNSA F
101: FSNIVSKATN LGLLLTGRDG NLNGALQVMS AQFHLPSPLV RPREVYFARY SRQLDFKTWL VADVSLESVY PNPLVQYKRR PSGCLIHGLQ SGLSLVTWVE
201: NNVVCDGSIP EMFRQTFKSG VAFSAKRWML TMERHYDRYA VLQKQQNQLL GQPLLDNNVR KGQKNLMKLA ERTIKSYNTI FSSCNENQWM PLSIHGGEDI
301: FVKTNMNLDA PGTPRGVVVM ISTSVWLPIP QNDVFKFLRA GGNRWKWDLL SYGCMTRDAL HIPSARDPAN SVSLVIVEPP NGRTNKSEMF YLQESFTDST
401: GMYIIFAPVD ASAVQYIMEG KDSDSVDMLA SGFAVLPCTS EGSILTMAFQ LMDEEISTPE YLPPHSVSTA NRLVSETVSL IKASLMFNSA F
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.