Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14500 | Sorghum | nucleus | 89.84 | 87.96 |
| Os08t0136100-01 | Rice | nucleus | 75.03 | 76.18 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 74.4 | 74.31 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 74.15 | 74.25 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 74.15 | 74.25 |
| HORVU7Hr1G073440.1 | Barley | nucleus | 74.03 | 74.12 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 61.36 | 74.09 |
| HORVU7Hr1G073450.1 | Barley | mitochondrion, nucleus | 71.52 | 71.61 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 64.62 | 70.94 |
| PGSC0003DMT400061859 | Potato | nucleus | 61.23 | 70.83 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 64.12 | 70.39 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 66.12 | 69.62 |
| KRH56105 | Soybean | nucleus | 63.36 | 69.27 |
| PGSC0003DMT400029291 | Potato | nucleus | 60.23 | 68.87 |
| Solyc03g031760.2.1 | Tomato | cytosol | 54.08 | 68.52 |
| Bra000807.1-P | Field mustard | nucleus | 51.32 | 68.51 |
| CDX90879 | Canola | nucleus | 61.48 | 68.44 |
| KRH13175 | Soybean | cytosol | 15.18 | 68.36 |
| CDY21319 | Canola | nucleus | 61.36 | 68.3 |
| Solyc10g005330.2.1 | Tomato | nucleus | 60.6 | 67.84 |
| KRH25398 | Soybean | plastid | 64.74 | 67.81 |
| CDY27417 | Canola | nucleus | 59.97 | 66.95 |
| CDX98703 | Canola | nucleus | 58.34 | 66.91 |
| CDX94054 | Canola | nucleus | 58.22 | 66.76 |
| CDY16639 | Canola | nucleus | 61.36 | 66.71 |
| CDX94586 | Canola | nucleus | 61.23 | 66.67 |
| KRH77881 | Soybean | nucleus | 60.98 | 66.48 |
| KRH26803 | Soybean | nucleus | 65.12 | 66.45 |
| KRH22554 | Soybean | nucleus | 64.99 | 66.33 |
| Bra015401.1-P | Field mustard | nucleus | 59.85 | 66.25 |
| KRH27601 | Soybean | nucleus | 60.73 | 66.12 |
| CDY06167 | Canola | nucleus | 59.72 | 66.11 |
| Bra032478.1-P | Field mustard | nucleus | 59.6 | 66.06 |
| CDX76399 | Canola | nucleus | 59.22 | 66.01 |
| AT4G04890.1 | Thale cress | nucleus | 61.48 | 65.95 |
| Bra029527.1-P | Field mustard | nucleus | 61.61 | 65.91 |
| GSMUA_Achr10P... | Banana | nucleus | 59.1 | 65.87 |
| AT1G05230.5 | Thale cress | nucleus | 59.35 | 65.6 |
| Zm00001d049443_P005 | Maize | nucleus | 65.5 | 65.58 |
| PGSC0003DMT400005277 | Potato | nucleus | 60.23 | 65.48 |
| Zm00001d002234_P003 | Maize | nucleus | 65.12 | 65.37 |
| AT4G21750.3 | Thale cress | nucleus | 62.23 | 65.09 |
| CDY66622 | Canola | nucleus | 59.6 | 64.98 |
| Solyc02g080260.2.1 | Tomato | nucleus | 60.98 | 64.71 |
| Bra038757.1-P | Field mustard | nucleus | 58.22 | 64.0 |
| CDY10041 | Canola | nucleus | 59.85 | 63.86 |
| CDX79091 | Canola | nucleus | 59.72 | 63.81 |
| GSMUA_Achr11P... | Banana | plastid | 62.74 | 63.37 |
| Bra020872.1-P | Field mustard | nucleus | 59.35 | 63.24 |
| Zm00001d026351_P003 | Maize | nucleus | 66.25 | 62.56 |
| Zm00001d000247_P001 | Maize | plasma membrane | 56.21 | 62.31 |
| Bra013556.1-P | Field mustard | nucleus | 53.2 | 61.45 |
| CDY71572 | Canola | nucleus | 29.49 | 59.8 |
| CDY49515 | Canola | plasma membrane | 60.35 | 59.31 |
| CDY46842 | Canola | nucleus | 60.23 | 57.83 |
| KRG91238 | Soybean | nucleus | 52.2 | 56.91 |
| CDY23096 | Canola | nucleus | 9.28 | 56.06 |
| KRH35579 | Soybean | nucleus | 51.82 | 53.08 |
| Zm00001d018225_P001 | Maize | nucleus | 42.03 | 48.41 |
| Zm00001d040090_P002 | Maize | nucleus | 48.06 | 47.7 |
| Zm00001d052133_P001 | Maize | nucleus | 41.66 | 47.56 |
| Zm00001d044973_P001 | Maize | nucleus | 41.03 | 47.46 |
| Zm00001d037140_P004 | Maize | nucleus | 40.9 | 47.45 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 13.3 | 44.73 |
| Zm00001d026088_P002 | Maize | nucleus | 44.17 | 42.21 |
| Zm00001d021236_P004 | Maize | nucleus | 46.05 | 40.64 |
| Zm00001d040091_P001 | Maize | nucleus | 12.67 | 38.7 |
| PGSC0003DMT400037397 | Potato | cytosol | 23.59 | 38.29 |
| Solyc10g006420.2.1 | Tomato | cytosol | 24.34 | 36.81 |
| KRH22254 | Soybean | cytosol | 24.47 | 36.45 |
| Zm00001d030069_P004 | Maize | nucleus | 40.15 | 36.2 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 14.18 | 34.24 |
| Zm00001d019477_P001 | Maize | nucleus | 31.49 | 34.1 |
| Zm00001d004234_P001 | Maize | nucleus | 29.23 | 32.96 |
| Zm00001d043231_P001 | Maize | nucleus | 28.73 | 28.91 |
| Zm00001d004230_P030 | Maize | nucleus | 26.35 | 25.8 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | UniProt:A0A1D6J125 | ProteinID:AQK41754.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 |
| ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF349 | SMART:SM00234 |
| SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0008456D45 |
| EnsemblPlantsGene:Zm00001d024701 | EnsemblPlants:Zm00001d024701_P001 | EnsemblPlants:Zm00001d024701_T001 | SEG:seg | : | : |
Description
Homeobox-transcription factor 18Homeodomain leucine zipper family IV protein%3B Putative homeobox/lipid-binding domain family protein isoform 1%3B Putative homeobox/lipid-binding domain family protein isoform 2
Coordinates
chr10:+:84124039..84129119
Molecular Weight (calculated)
85653.9 Da
IEP (calculated)
6.385
GRAVY (calculated)
-0.256
Length
797 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGLMTPGR NMPTAAAMIG GLASYAASFG QNMMDGHHQL AMMQQQHQNH GQQQAATSES DARGPRHDEL LMESKSGSDN MEGGARSGGS GGEELQEEDL
101: GLRQPARKKR YHRHTQHQIQ ELEAFFKEYP HPDDKQRKEL SRELGLEPLQ VKFWFQNKRT QMKTQQERHE NMQLRAENEK LRAENARYKD ALANASCPSC
201: GGPAATAVIG EMSFDEHHLR VENARLRDEV DRISTIAAKY VGKPAGSLLL LPPNNLSNNV SGPALSSHHH LLPGGTDVFG GLHRHAGGGF DFDKGLVVEL
301: AVAAMEELVR MALLGEPLWI PALAVDGATT ETLNEEEYAR GFFPRGVGPK LPELRSEASR EAVVVIMNHV SLIEMLMDVN QWSTLFSSIV SRAATLEVLS
401: TGVAGNYNGA LQLMTAEFQM PSPLVPTREC QFLRYCKQHT DGSWAVVDVS VEGQLLRTGS RQGRGRGRRR PSGCLIQEMP NGYSRVTWVE HAEADDMMVH
501: DLYRPLVCSG LAFGARRWAS TLERQCERLA SAMASGVVVP AAAAGPAAGV VTSPEGRRSM MRLAERMVAS FCGGVTASTT HQWTTLSGSG AEDVRVMTRK
601: SVDDPGRPPG IILNAATSFW LPVAPARVFG FLRDDATRSE WDMLSNGGDV QEMAHIANGR DHGNAVSLLR VDNANSNQGN MLILQECCTD ATGSYVIYAP
701: VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GGGGGGGGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIA CTVERIKAAV AADNAGVAAA AAATSHH
101: GLRQPARKKR YHRHTQHQIQ ELEAFFKEYP HPDDKQRKEL SRELGLEPLQ VKFWFQNKRT QMKTQQERHE NMQLRAENEK LRAENARYKD ALANASCPSC
201: GGPAATAVIG EMSFDEHHLR VENARLRDEV DRISTIAAKY VGKPAGSLLL LPPNNLSNNV SGPALSSHHH LLPGGTDVFG GLHRHAGGGF DFDKGLVVEL
301: AVAAMEELVR MALLGEPLWI PALAVDGATT ETLNEEEYAR GFFPRGVGPK LPELRSEASR EAVVVIMNHV SLIEMLMDVN QWSTLFSSIV SRAATLEVLS
401: TGVAGNYNGA LQLMTAEFQM PSPLVPTREC QFLRYCKQHT DGSWAVVDVS VEGQLLRTGS RQGRGRGRRR PSGCLIQEMP NGYSRVTWVE HAEADDMMVH
501: DLYRPLVCSG LAFGARRWAS TLERQCERLA SAMASGVVVP AAAAGPAAGV VTSPEGRRSM MRLAERMVAS FCGGVTASTT HQWTTLSGSG AEDVRVMTRK
601: SVDDPGRPPG IILNAATSFW LPVAPARVFG FLRDDATRSE WDMLSNGGDV QEMAHIANGR DHGNAVSLLR VDNANSNQGN MLILQECCTD ATGSYVIYAP
701: VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GGGGGGGGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIA CTVERIKAAV AADNAGVAAA AAATSHH
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.