Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015401.1-P | Field mustard | nucleus | 86.02 | 99.17 |
| CDY06167 | Canola | nucleus | 83.01 | 95.69 |
| AT1G05230.5 | Thale cress | nucleus | 81.69 | 94.04 |
| CDY49515 | Canola | plasma membrane | 91.81 | 93.96 |
| CDY71572 | Canola | nucleus | 44.1 | 93.13 |
| CDY10041 | Canola | nucleus | 82.77 | 91.97 |
| KRH56105 | Soybean | nucleus | 69.64 | 79.29 |
| KRH25398 | Soybean | plastid | 70.0 | 76.35 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 69.52 | 76.22 |
| KRH22554 | Soybean | nucleus | 70.84 | 75.29 |
| KRH26803 | Soybean | nucleus | 70.36 | 74.78 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 59.4 | 74.7 |
| CDX90879 | Canola | nucleus | 62.17 | 72.07 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 50.84 | 72.01 |
| CDY21319 | Canola | nucleus | 62.05 | 71.93 |
| CDY16639 | Canola | nucleus | 62.53 | 70.8 |
| CDX94586 | Canola | nucleus | 62.41 | 70.77 |
| CDX98703 | Canola | nucleus | 58.92 | 70.36 |
| CDX94054 | Canola | nucleus | 58.55 | 69.93 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 60.96 | 69.7 |
| CDY27417 | Canola | nucleus | 59.88 | 69.61 |
| CDX76399 | Canola | nucleus | 59.88 | 69.51 |
| CDY66622 | Canola | nucleus | 60.24 | 68.4 |
| GSMUA_Achr10P... | Banana | nucleus | 58.19 | 67.55 |
| CDX79091 | Canola | nucleus | 60.48 | 67.29 |
| EES11464 | Sorghum | nucleus | 63.25 | 66.54 |
| EES13460 | Sorghum | mitochondrion, nucleus | 61.33 | 65.17 |
| GSMUA_Achr11P... | Banana | plastid | 61.57 | 64.77 |
| Os08t0136100-01 | Rice | nucleus | 61.2 | 64.71 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 60.36 | 64.65 |
| Zm00001d049443_P005 | Maize | nucleus | 61.93 | 64.57 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 60.36 | 64.56 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 60.36 | 64.48 |
| Zm00001d002234_P003 | Maize | nucleus | 61.2 | 63.98 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 59.52 | 61.9 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 59.28 | 61.81 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 59.16 | 61.68 |
| Zm00001d026351_P003 | Maize | nucleus | 62.41 | 61.37 |
| Zm00001d000247_P001 | Maize | plasma membrane | 52.65 | 60.78 |
| CDY23096 | Canola | nucleus | 9.64 | 60.61 |
| Zm00001d024701_P001 | Maize | nucleus | 57.83 | 60.23 |
| EES14500 | Sorghum | nucleus | 59.04 | 60.2 |
| CDY12213 | Canola | nucleus | 46.27 | 53.93 |
| CDY48272 | Canola | nucleus | 45.66 | 53.84 |
| CDY30748 | Canola | endoplasmic reticulum | 37.47 | 52.98 |
| CDY19129 | Canola | nucleus | 43.61 | 49.79 |
| CDY15339 | Canola | nucleus | 43.73 | 49.66 |
| CDY18903 | Canola | nucleus | 40.84 | 48.09 |
| CDX74762 | Canola | nucleus | 40.96 | 48.02 |
| CDY51143 | Canola | nucleus | 45.06 | 47.34 |
| CDY07201 | Canola | nucleus | 44.7 | 47.08 |
| CDX67855 | Canola | nucleus | 44.22 | 47.05 |
| CDX74347 | Canola | nucleus | 44.94 | 47.04 |
| CDX91894 | Canola | nucleus | 44.94 | 46.98 |
| CDX96744 | Canola | nucleus | 38.07 | 46.95 |
| CDY45684 | Canola | nucleus | 44.22 | 46.81 |
| CDX96471 | Canola | nucleus | 39.88 | 46.1 |
| CDX68229 | Canola | nucleus | 39.04 | 46.09 |
| CDX83884 | Canola | nucleus | 37.71 | 45.69 |
| CDY11109 | Canola | nucleus | 39.04 | 45.63 |
| CDX72984 | Canola | nucleus | 39.28 | 45.59 |
| CDY26204 | Canola | nucleus | 34.94 | 45.53 |
| CDY42097 | Canola | nucleus | 27.95 | 44.87 |
| CDY19185 | Canola | nucleus | 36.87 | 44.87 |
| CDY26205 | Canola | nucleus | 37.23 | 44.78 |
| CDY31916 | Canola | nucleus | 35.78 | 44.13 |
| CDY00515 | Canola | nucleus | 35.42 | 43.69 |
| CDX89415 | Canola | cytosol, mitochondrion | 9.16 | 42.7 |
| Os08t0187500-01 | Rice | nucleus | 16.51 | 42.02 |
| CDY43458 | Canola | nucleus | 37.71 | 38.55 |
| CDY03177 | Canola | nucleus | 38.19 | 38.38 |
| CDX76559 | Canola | nucleus | 33.86 | 38.28 |
| CDY08866 | Canola | nucleus | 33.61 | 37.91 |
| CDX67929 | Canola | nucleus | 35.66 | 37.8 |
| CDX77711 | Canola | nucleus | 37.47 | 37.79 |
| CDX79408 | Canola | nucleus | 35.42 | 37.69 |
| CDY33492 | Canola | nucleus | 36.14 | 37.69 |
| CDX85461 | Canola | cytosol | 30.0 | 35.32 |
| CDY67945 | Canola | nucleus | 28.19 | 33.96 |
| CDY42301 | Canola | nucleus | 28.19 | 33.91 |
| CDY62389 | Canola | cytosol | 19.76 | 33.54 |
| CDY43137 | Canola | nucleus | 27.83 | 33.53 |
| CDY02713 | Canola | nucleus | 29.76 | 33.42 |
| CDY53691 | Canola | nucleus | 28.55 | 33.38 |
| CDY39874 | Canola | plasma membrane | 7.71 | 33.33 |
| CDY44946 | Canola | nucleus | 25.66 | 32.87 |
| CDY16938 | Canola | nucleus | 25.9 | 32.58 |
| CDY69499 | Canola | cytosol | 11.81 | 32.24 |
| CDY49937 | Canola | nucleus | 26.51 | 31.7 |
| CDY21211 | Canola | nucleus | 26.27 | 31.41 |
| CDX89416 | Canola | nucleus | 24.34 | 31.12 |
| CDX94443 | Canola | cytosol | 22.65 | 29.94 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078I9L9 | UniProt:A0A078I9L9 | EnsemblPlants:CDY46842 |
| ProteinID:CDY46842 | ProteinID:CDY46842.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00086287001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF513 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0004EE18C1 | SEG:seg | : | : |
Description
BnaA10g03260DBnaA10g03260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9L9]
Coordinates
chrLK032687:-:44824..50549
Molecular Weight (calculated)
92230.9 Da
IEP (calculated)
6.967
GRAVY (calculated)
-0.346
Length
830 amino acids
Sequence
(BLAST)
(BLAST)
001: MYYPIFYSKS CIYDNNVSHS HHLISLHPLN TLPLLSSPNF SSLFLRDLHL AFKLFDKKPL DQYKTISGFP TNKSQATHGT LLSLPLGFRR VFLAMKKVKG
101: LGFNFKCKKK MFEPNMFLAA MNNEDSNNHN YNHEDNNNNN ERFLRDEEFD SANTKSGSEN QEGGSGNDQD NHHPNKKKRY HRHTQLQIQE MEAFFKECPH
201: PDDKQRKQLS RELGLEPLQV KFWFQNKRTQ MKNHHERHEN SHLRAENEKL RGDNIRYREA LANASCPNCG GPTVIGEMSF DEHQLRLENA RLREEIDRIS
301: AIAAKYVGKP VSSYPLMSPP PLPPRPLELA MGNFGGDVYG NNPTDLFKSI TAPTESDKPL IIDLAVAAME ELMRMTQVEE SLWKSLVLDE EEYARTFPRG
401: IGSKPAGFRT EASRESAVVI MNHVNIVEIL MDVNQWSVVF AGMVSRAVTL AVLSTGVAGN YNGALQVMSA EFQVPTPLVP TRETYFARYC KQQADGSWAV
501: VDISLDSLQP NPPVRCRRRA SGCLIQEMPN GYSKVTWVEH VEVDDRGVHD LYKHMVSTCH AFGAKRWVAI LDRQCERLAS VMATNISSGE VGVITNQEGR
601: RSMLKLAERM VISFCAGVSA STAHTWTTLS GTGAEDVRVM TRKSVDDPGR PPGIVLSAAT SFWIPVPPKR VFDFLRDENS RNEWDILSNG GVVQEMAHIA
701: NGRDTGNCVS LLRVNSANSS QSNMLILQES CTDPTASFVI YAPVDIVAMN IVLNGGDPDY VALLPSGFAI LPDGNATGGG EGGSLLTVAF QILVDSVPTA
801: KLSLGSVATV NNLIACTVER IKAAMSCETA
101: LGFNFKCKKK MFEPNMFLAA MNNEDSNNHN YNHEDNNNNN ERFLRDEEFD SANTKSGSEN QEGGSGNDQD NHHPNKKKRY HRHTQLQIQE MEAFFKECPH
201: PDDKQRKQLS RELGLEPLQV KFWFQNKRTQ MKNHHERHEN SHLRAENEKL RGDNIRYREA LANASCPNCG GPTVIGEMSF DEHQLRLENA RLREEIDRIS
301: AIAAKYVGKP VSSYPLMSPP PLPPRPLELA MGNFGGDVYG NNPTDLFKSI TAPTESDKPL IIDLAVAAME ELMRMTQVEE SLWKSLVLDE EEYARTFPRG
401: IGSKPAGFRT EASRESAVVI MNHVNIVEIL MDVNQWSVVF AGMVSRAVTL AVLSTGVAGN YNGALQVMSA EFQVPTPLVP TRETYFARYC KQQADGSWAV
501: VDISLDSLQP NPPVRCRRRA SGCLIQEMPN GYSKVTWVEH VEVDDRGVHD LYKHMVSTCH AFGAKRWVAI LDRQCERLAS VMATNISSGE VGVITNQEGR
601: RSMLKLAERM VISFCAGVSA STAHTWTTLS GTGAEDVRVM TRKSVDDPGR PPGIVLSAAT SFWIPVPPKR VFDFLRDENS RNEWDILSNG GVVQEMAHIA
701: NGRDTGNCVS LLRVNSANSS QSNMLILQES CTDPTASFVI YAPVDIVAMN IVLNGGDPDY VALLPSGFAI LPDGNATGGG EGGSLLTVAF QILVDSVPTA
801: KLSLGSVATV NNLIACTVER IKAAMSCETA
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.