Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22554 | Soybean | nucleus | 98.34 | 98.34 |
| KRH56105 | Soybean | nucleus | 86.68 | 92.87 |
| KRH25398 | Soybean | plastid | 89.63 | 91.98 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 85.92 | 88.64 |
| KRH13175 | Soybean | cytosol | 18.95 | 83.62 |
| AT1G05230.5 | Thale cress | nucleus | 74.14 | 80.31 |
| Bra015401.1-P | Field mustard | nucleus | 74.01 | 80.28 |
| CDY06167 | Canola | nucleus | 73.88 | 80.14 |
| Bra032478.1-P | Field mustard | nucleus | 73.75 | 80.11 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 66.71 | 78.94 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 71.7 | 77.14 |
| CDY10041 | Canola | nucleus | 73.75 | 77.11 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 57.11 | 76.11 |
| KRH77881 | Soybean | nucleus | 68.89 | 73.6 |
| KRH27601 | Soybean | nucleus | 68.76 | 73.36 |
| CDY71572 | Canola | nucleus | 36.88 | 73.28 |
| EES11464 | Sorghum | nucleus | 73.11 | 72.37 |
| CDY49515 | Canola | plasma membrane | 74.9 | 72.13 |
| GSMUA_Achr10P... | Banana | nucleus | 65.56 | 71.61 |
| EES13460 | Sorghum | mitochondrion, nucleus | 71.06 | 71.06 |
| GSMUA_Achr11P... | Banana | plastid | 71.7 | 70.98 |
| CDY46842 | Canola | nucleus | 74.78 | 70.36 |
| Zm00001d002234_P003 | Maize | nucleus | 71.32 | 70.15 |
| Os08t0136100-01 | Rice | nucleus | 70.29 | 69.94 |
| Zm00001d049443_P005 | Maize | nucleus | 71.06 | 69.72 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 68.89 | 69.42 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 68.89 | 69.33 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 68.89 | 69.24 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 68.5 | 67.04 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 68.12 | 66.83 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 67.99 | 66.71 |
| Zm00001d026351_P003 | Maize | nucleus | 72.09 | 66.71 |
| Zm00001d000247_P001 | Maize | plasma membrane | 60.69 | 65.92 |
| EES14500 | Sorghum | nucleus | 67.99 | 65.23 |
| Zm00001d024701_P001 | Maize | nucleus | 66.45 | 65.12 |
| KRG91238 | Soybean | nucleus | 58.13 | 62.11 |
| KRH35579 | Soybean | nucleus | 57.75 | 57.97 |
| KRH35356 | Soybean | nucleus | 51.34 | 52.42 |
| KRH48236 | Soybean | nucleus | 55.06 | 51.87 |
| KRG91457 | Soybean | nucleus | 51.6 | 51.87 |
| KRH40539 | Soybean | nucleus | 54.29 | 51.71 |
| KRH00641 | Soybean | nucleus | 54.03 | 51.34 |
| KRH65144 | Soybean | nucleus | 54.8 | 51.2 |
| KRH09477 | Soybean | nucleus | 46.35 | 50.42 |
| KRH38939 | Soybean | nucleus | 46.61 | 50.42 |
| KRH60596 | Soybean | nucleus | 45.33 | 49.65 |
| KRH41898 | Soybean | nucleus | 45.71 | 49.51 |
| Os08t0187500-01 | Rice | nucleus | 19.85 | 47.55 |
| KRH38560 | Soybean | nucleus | 47.12 | 47.42 |
| KRH09109 | Soybean | plastid | 46.73 | 47.1 |
| KRH44348 | Soybean | nucleus | 42.64 | 44.52 |
| KRH47277 | Soybean | nucleus | 42.0 | 43.68 |
| KRH74360 | Soybean | nucleus | 43.66 | 43.22 |
| KRH09884 | Soybean | plastid | 41.36 | 43.01 |
| KRH23432 | Soybean | plastid | 41.87 | 42.91 |
| KRH39579 | Soybean | nucleus | 43.15 | 42.12 |
| KRH22254 | Soybean | cytosol | 27.27 | 39.81 |
| KRH11810 | Soybean | nucleus | 35.21 | 38.57 |
| KRH36827 | Soybean | nucleus | 34.06 | 37.52 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 15.36 | 36.36 |
| KRH36826 | Soybean | nucleus | 33.03 | 36.19 |
| KRH42428 | Soybean | nucleus | 31.88 | 32.89 |
| KRH42429 | Soybean | cytosol | 26.5 | 28.36 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100797992 | MapMan:15.5.3.3 | EMBL:ACUP02007748 | ncoils:Coil | EnsemblPlantsGene:GLYMA_12G194400 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | UniProt:K7LVW4 | EnsemblPlants:KRH26803 | ProteinID:KRH26803 |
| ProteinID:KRH26803.1 | ProteinID:KRH26804.1 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF513 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI00023D00EB | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr12:-:35606827..35612308
Molecular Weight (calculated)
84647.9 Da
IEP (calculated)
6.010
GRAVY (calculated)
-0.258
Length
781 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAGIMIPAR NMPSMIGRNG TVGGFGLSSG LSLGHIENHK ASESQRSVEM FQPNLMEAGQ LHPLDMPQNT SESDVPRIRE DDFDSATKSG SENLEGASGE
101: DQDPRPNKKK RYHRHTQHQI QEMEAFFKEC PHPDDKQRKE LSRELGLEPL QVKFWFQNKR TQMKTQHERH ENTQLRTENE KLRADNMRFR EALGNASCPN
201: CGGPTAIGEM SFDEHHLRLE NARLREEIDR ISAIAAKYVG KPVVSYPLVS PSSVPPRPLE LGVSGGFGGQ PGGIGGDMYG GAAGDLLRSI SGPTEADKPI
301: IIELAVAAME ELIGMAQMGE PLWLTTLDGT TVLNEDEYIR SFPRGIGPKP VGFKCEASRE TAVVIMNHVN LVEILMDVNQ WSTVFSGIVS RAMTLEVLST
401: GVAGNYNGAL QVMTAEVQVP SPLVPTRESY FVRYCKQHGD GTWAVVDVSL DNLRPSPSAR CRRRPSGCLI QEMPNGYSKV IWVEHVEVDD RGVHNLYKQL
501: VSSGHAFGAK RWIANLDRQC ERLASAMATN IPTVDVGVIT NPDGRKSMLK LAERMVISFC AGVSASTAHT WTTLSGTGAD DVRVMTRKSV DDPGRPPGIV
601: LSAATSFWLP VSPKRVFEFL RDENSRSEWD ILSNGGVVQE MAHIANGRDT GNCVSLLRVN SANSSQSNML ILQESCADST GSFVIYAPVD IVAMNVVLNG
701: GDPDYVALLP SGFAILPDGT TAHGGGIGDI GHGGSLLTVA FQILVDSVPT AKLSLGSVAT VNNLIACTVE RIKAALSGEV A
101: DQDPRPNKKK RYHRHTQHQI QEMEAFFKEC PHPDDKQRKE LSRELGLEPL QVKFWFQNKR TQMKTQHERH ENTQLRTENE KLRADNMRFR EALGNASCPN
201: CGGPTAIGEM SFDEHHLRLE NARLREEIDR ISAIAAKYVG KPVVSYPLVS PSSVPPRPLE LGVSGGFGGQ PGGIGGDMYG GAAGDLLRSI SGPTEADKPI
301: IIELAVAAME ELIGMAQMGE PLWLTTLDGT TVLNEDEYIR SFPRGIGPKP VGFKCEASRE TAVVIMNHVN LVEILMDVNQ WSTVFSGIVS RAMTLEVLST
401: GVAGNYNGAL QVMTAEVQVP SPLVPTRESY FVRYCKQHGD GTWAVVDVSL DNLRPSPSAR CRRRPSGCLI QEMPNGYSKV IWVEHVEVDD RGVHNLYKQL
501: VSSGHAFGAK RWIANLDRQC ERLASAMATN IPTVDVGVIT NPDGRKSMLK LAERMVISFC AGVSASTAHT WTTLSGTGAD DVRVMTRKSV DDPGRPPGIV
601: LSAATSFWLP VSPKRVFEFL RDENSRSEWD ILSNGGVVQE MAHIANGRDT GNCVSLLRVN SANSSQSNML ILQESCADST GSFVIYAPVD IVAMNVVLNG
701: GDPDYVALLP SGFAILPDGT TAHGGGIGDI GHGGSLLTVA FQILVDSVPT AKLSLGSVAT VNNLIACTVE RIKAALSGEV A
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.