Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- plastid 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06167 | Canola | nucleus | 85.45 | 96.25 |
| AT1G05230.5 | Thale cress | nucleus | 83.72 | 94.17 |
| CDY71572 | Canola | nucleus | 45.13 | 93.13 |
| CDY10041 | Canola | nucleus | 85.08 | 92.37 |
| CDY46842 | Canola | nucleus | 93.96 | 91.81 |
| KRH56105 | Soybean | nucleus | 71.27 | 79.29 |
| KRH25398 | Soybean | plastid | 71.76 | 76.48 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 71.27 | 76.35 |
| KRH22554 | Soybean | nucleus | 72.63 | 75.42 |
| KRH26803 | Soybean | nucleus | 72.13 | 74.9 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 60.67 | 74.55 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 52.16 | 72.18 |
| CDX90879 | Canola | nucleus | 63.63 | 72.07 |
| CDY21319 | Canola | nucleus | 63.5 | 71.93 |
| CDX94586 | Canola | nucleus | 64.0 | 70.9 |
| CDY16639 | Canola | nucleus | 64.0 | 70.8 |
| CDX98703 | Canola | nucleus | 60.42 | 70.5 |
| CDX94054 | Canola | nucleus | 60.05 | 70.07 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 62.64 | 69.97 |
| CDY27417 | Canola | nucleus | 61.41 | 69.75 |
| CDX76399 | Canola | nucleus | 61.41 | 69.65 |
| CDY66622 | Canola | nucleus | 61.65 | 68.4 |
| GSMUA_Achr10P... | Banana | nucleus | 59.56 | 67.55 |
| CDX79091 | Canola | nucleus | 62.02 | 67.43 |
| EES11464 | Sorghum | nucleus | 65.1 | 66.92 |
| EES13460 | Sorghum | mitochondrion, nucleus | 62.89 | 65.3 |
| GSMUA_Achr11P... | Banana | plastid | 63.13 | 64.89 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 61.9 | 64.77 |
| Os08t0136100-01 | Rice | nucleus | 62.64 | 64.71 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 61.9 | 64.69 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 61.9 | 64.61 |
| Zm00001d049443_P005 | Maize | nucleus | 63.38 | 64.57 |
| Zm00001d002234_P003 | Maize | nucleus | 62.89 | 64.23 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 61.04 | 62.03 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 60.79 | 61.93 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 60.67 | 61.81 |
| Zm00001d026351_P003 | Maize | nucleus | 64.12 | 61.61 |
| Zm00001d000247_P001 | Maize | plasma membrane | 54.01 | 60.92 |
| CDY23096 | Canola | nucleus | 9.86 | 60.61 |
| Zm00001d024701_P001 | Maize | nucleus | 59.31 | 60.35 |
| EES14500 | Sorghum | nucleus | 60.54 | 60.32 |
| CDY12213 | Canola | nucleus | 47.35 | 53.93 |
| CDY48272 | Canola | nucleus | 46.73 | 53.84 |
| CDY30748 | Canola | endoplasmic reticulum | 38.35 | 52.98 |
| CDY19129 | Canola | nucleus | 45.01 | 50.21 |
| CDY15339 | Canola | nucleus | 45.13 | 50.07 |
| CDY18903 | Canola | nucleus | 41.8 | 48.09 |
| CDX74762 | Canola | nucleus | 41.92 | 48.02 |
| CDX91894 | Canola | nucleus | 46.36 | 47.36 |
| CDY51143 | Canola | nucleus | 46.12 | 47.34 |
| CDX67855 | Canola | nucleus | 45.5 | 47.31 |
| CDY07201 | Canola | nucleus | 45.87 | 47.21 |
| CDX74347 | Canola | nucleus | 46.12 | 47.16 |
| CDY45684 | Canola | nucleus | 45.5 | 47.07 |
| CDX96744 | Canola | nucleus | 38.84 | 46.81 |
| CDX96471 | Canola | nucleus | 40.69 | 45.96 |
| CDX68229 | Canola | nucleus | 39.83 | 45.95 |
| CDX83884 | Canola | nucleus | 38.47 | 45.55 |
| CDY11109 | Canola | nucleus | 39.83 | 45.49 |
| CDX72984 | Canola | nucleus | 40.07 | 45.45 |
| CDY26204 | Canola | nucleus | 35.63 | 45.37 |
| CDY19185 | Canola | nucleus | 37.61 | 44.72 |
| CDY42097 | Canola | nucleus | 28.48 | 44.68 |
| CDY26205 | Canola | nucleus | 37.98 | 44.64 |
| CDY31916 | Canola | nucleus | 36.5 | 43.98 |
| CDY00515 | Canola | nucleus | 36.25 | 43.69 |
| CDX89415 | Canola | cytosol, mitochondrion | 9.37 | 42.7 |
| Os08t0187500-01 | Rice | nucleus | 16.89 | 42.02 |
| CDY43458 | Canola | nucleus | 38.47 | 38.42 |
| CDX76559 | Canola | nucleus | 34.65 | 38.28 |
| CDY03177 | Canola | nucleus | 38.72 | 38.01 |
| CDY08866 | Canola | nucleus | 34.4 | 37.91 |
| CDX67929 | Canola | nucleus | 36.5 | 37.8 |
| CDX79408 | Canola | nucleus | 36.25 | 37.69 |
| CDX77711 | Canola | nucleus | 37.98 | 37.42 |
| CDY33492 | Canola | nucleus | 36.62 | 37.31 |
| CDX85461 | Canola | cytosol | 30.83 | 35.46 |
| CDY42301 | Canola | nucleus | 28.98 | 34.06 |
| CDY67945 | Canola | nucleus | 28.85 | 33.96 |
| CDY02713 | Canola | nucleus | 30.58 | 33.56 |
| CDY43137 | Canola | nucleus | 28.48 | 33.53 |
| CDY62389 | Canola | cytosol | 20.1 | 33.33 |
| CDY53691 | Canola | nucleus | 29.1 | 33.24 |
| CDY44946 | Canola | nucleus | 26.51 | 33.18 |
| CDY39874 | Canola | plasma membrane | 7.77 | 32.81 |
| CDY69499 | Canola | cytosol | 12.21 | 32.57 |
| CDY16938 | Canola | nucleus | 26.14 | 32.12 |
| CDY49937 | Canola | nucleus | 27.13 | 31.7 |
| CDY21211 | Canola | nucleus | 26.88 | 31.41 |
| CDX89416 | Canola | nucleus | 24.91 | 31.12 |
| CDX94443 | Canola | cytosol | 23.06 | 29.78 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078IF69 | UniProt:A0A078IF69 | EnsemblPlants:CDY49515 |
| ProteinID:CDY49515 | ProteinID:CDY49515.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00093202001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF513 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0004EEDCDE | SEG:seg | : | : |
Description
BnaC05g03270DBnaC05g03270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IF69]
Coordinates
chrLK032838:-:46172..52028
Molecular Weight (calculated)
90238.4 Da
IEP (calculated)
7.094
GRAVY (calculated)
-0.396
Length
811 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSLALYKHF FFFLQDLHLA FKLFAKKPPD QYKTISGFPT NKAQTTHRYA PLSPFRASPR LPNNLLRCMS EDNTRKKVKG LAFNFKFKKK MFEPNMFLAA
101: MNNEDSNNHN YNHEDNNNNN ERFLRDEEFD SANTKSGSEN QEGGSGNDQD NHHPNKKKRY HRHTQLQIQE MEAFFKECPH PDDKQRKQLS RELGLEPLQV
201: KFWFQNKRTQ MKNHHERHEN SHLRAENEKL RGDNIRYREA LANASCPNCG GPTVIGEMSF DEHQLRLENA RLREEIDRIS AIAAKYVGKP VSSYPLMSPP
301: PLPPRPLELA MGNFGGDVYG NNPTDLFKSI TAPTESDKPL IIDLAVAAME ELMRMTQVDE PLWKSLVVDE EEYARTFPRG IGPKPAGFRT EASRESVVVI
401: MNHVNIVEIL MDVNQWSVVF AGMVSRAVSL AVLSTGVAGN YNGALQVMSA EFQVPTPLVP TRETYFARYC KQQADGSWAV VDISLDSLQP NPPVRCRRRA
501: SGCLIQEMPN GYSKVTWVEH VEVDDRGGVH DLYKHMVSTG HAFGAKRWVA ILDRQCERLA SVMATNISPG EVGVITNQEG RRSMLKLAER MVISFCAGVS
601: ASTAHTWTTL SGTGAEDVRV MTRKSVDDPG RPPGIVLSAA TSFWIPVPPK RVFDFLRDEN SRNEWDILSN GGVVQEMAHI ANGRDTGNCV SLLRVNSANS
701: SQSNMLILQE SCTDPTASFV IYAPVDIVAM NIVLNGGDPD YVALLPSGFA ILPDGNANGG GEGGSLLTVA FQILVDSVPT AKLSLGSVAT VNNLIACTVE
801: RIKAAMSCET A
101: MNNEDSNNHN YNHEDNNNNN ERFLRDEEFD SANTKSGSEN QEGGSGNDQD NHHPNKKKRY HRHTQLQIQE MEAFFKECPH PDDKQRKQLS RELGLEPLQV
201: KFWFQNKRTQ MKNHHERHEN SHLRAENEKL RGDNIRYREA LANASCPNCG GPTVIGEMSF DEHQLRLENA RLREEIDRIS AIAAKYVGKP VSSYPLMSPP
301: PLPPRPLELA MGNFGGDVYG NNPTDLFKSI TAPTESDKPL IIDLAVAAME ELMRMTQVDE PLWKSLVVDE EEYARTFPRG IGPKPAGFRT EASRESVVVI
401: MNHVNIVEIL MDVNQWSVVF AGMVSRAVSL AVLSTGVAGN YNGALQVMSA EFQVPTPLVP TRETYFARYC KQQADGSWAV VDISLDSLQP NPPVRCRRRA
501: SGCLIQEMPN GYSKVTWVEH VEVDDRGGVH DLYKHMVSTG HAFGAKRWVA ILDRQCERLA SVMATNISPG EVGVITNQEG RRSMLKLAER MVISFCAGVS
601: ASTAHTWTTL SGTGAEDVRV MTRKSVDDPG RPPGIVLSAA TSFWIPVPPK RVFDFLRDEN SRNEWDILSN GGVVQEMAHI ANGRDTGNCV SLLRVNSANS
701: SQSNMLILQE SCTDPTASFV IYAPVDIVAM NIVLNGGDPD YVALLPSGFA ILPDGNANGG GEGGSLLTVA FQILVDSVPT AKLSLGSVAT VNNLIACTVE
801: RIKAAMSCET A
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.