Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032478.1-P | Field mustard | nucleus | 99.58 | 99.72 |
| CDY71572 | Canola | nucleus | 52.92 | 96.95 |
| AT1G05230.5 | Thale cress | nucleus | 95.14 | 95.01 |
| CDY10041 | Canola | nucleus | 97.78 | 94.24 |
| CDY49515 | Canola | plasma membrane | 96.25 | 85.45 |
| CDY46842 | Canola | nucleus | 95.69 | 83.01 |
| KRH56105 | Soybean | nucleus | 80.69 | 79.7 |
| KRH25398 | Soybean | plastid | 80.42 | 76.08 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 79.72 | 75.83 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 68.75 | 75.0 |
| KRH22554 | Soybean | nucleus | 80.69 | 74.39 |
| KRH26803 | Soybean | nucleus | 80.14 | 73.88 |
| CDX90879 | Canola | nucleus | 72.36 | 72.77 |
| CDY21319 | Canola | nucleus | 72.22 | 72.63 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 58.47 | 71.84 |
| CDX94586 | Canola | nucleus | 72.36 | 71.17 |
| CDY16639 | Canola | nucleus | 72.36 | 71.08 |
| CDX98703 | Canola | nucleus | 68.19 | 70.65 |
| CDX94054 | Canola | nucleus | 67.78 | 70.22 |
| CDY27417 | Canola | nucleus | 69.58 | 70.17 |
| CDX76399 | Canola | nucleus | 69.58 | 70.07 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 70.14 | 69.56 |
| CDY66622 | Canola | nucleus | 69.72 | 68.67 |
| CDX79091 | Canola | nucleus | 70.0 | 67.56 |
| GSMUA_Achr10P... | Banana | nucleus | 66.67 | 67.13 |
| EES11464 | Sorghum | nucleus | 72.64 | 66.29 |
| GSMUA_Achr11P... | Banana | plastid | 70.97 | 64.77 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 69.58 | 64.65 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 69.58 | 64.56 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 69.58 | 64.48 |
| EES13460 | Sorghum | mitochondrion, nucleus | 69.72 | 64.28 |
| Os08t0136100-01 | Rice | nucleus | 70.0 | 64.2 |
| Zm00001d002234_P003 | Maize | nucleus | 70.14 | 63.6 |
| Zm00001d049443_P005 | Maize | nucleus | 70.28 | 63.57 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 68.19 | 61.53 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 67.92 | 61.43 |
| CDY23096 | Canola | nucleus | 11.25 | 61.36 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 67.78 | 61.31 |
| Zm00001d026351_P003 | Maize | nucleus | 71.81 | 61.26 |
| Zm00001d000247_P001 | Maize | plasma membrane | 60.0 | 60.08 |
| Zm00001d024701_P001 | Maize | nucleus | 66.11 | 59.72 |
| EES14500 | Sorghum | nucleus | 67.36 | 59.58 |
| CDY12213 | Canola | nucleus | 53.33 | 53.93 |
| CDY48272 | Canola | nucleus | 52.5 | 53.69 |
| CDY30748 | Canola | endoplasmic reticulum | 43.19 | 52.98 |
| CDY19129 | Canola | nucleus | 50.42 | 49.93 |
| CDY15339 | Canola | nucleus | 50.56 | 49.79 |
| CDY18903 | Canola | nucleus | 46.53 | 47.52 |
| CDX74762 | Canola | nucleus | 46.67 | 47.46 |
| CDX96744 | Canola | nucleus | 44.03 | 47.1 |
| CDY51143 | Canola | nucleus | 51.39 | 46.84 |
| CDY07201 | Canola | nucleus | 51.11 | 46.7 |
| CDX67855 | Canola | nucleus | 50.42 | 46.54 |
| CDX91894 | Canola | nucleus | 51.11 | 46.35 |
| CDY45684 | Canola | nucleus | 50.42 | 46.3 |
| CDX74347 | Canola | nucleus | 50.97 | 46.28 |
| CDX68229 | Canola | nucleus | 45.0 | 46.09 |
| CDX83884 | Canola | nucleus | 43.47 | 45.69 |
| CDX96471 | Canola | nucleus | 45.56 | 45.68 |
| CDY11109 | Canola | nucleus | 45.0 | 45.63 |
| CDX72984 | Canola | nucleus | 44.86 | 45.17 |
| CDY42097 | Canola | nucleus | 32.36 | 45.07 |
| CDY26204 | Canola | nucleus | 39.86 | 45.05 |
| CDY19185 | Canola | nucleus | 42.08 | 44.43 |
| CDY26205 | Canola | nucleus | 42.5 | 44.35 |
| CDY31916 | Canola | nucleus | 40.97 | 43.83 |
| CDY00515 | Canola | nucleus | 40.69 | 43.54 |
| Os08t0187500-01 | Rice | nucleus | 19.44 | 42.94 |
| CDX89415 | Canola | cytosol, mitochondrion | 10.28 | 41.57 |
| CDX76559 | Canola | nucleus | 39.17 | 38.42 |
| CDY43458 | Canola | nucleus | 42.92 | 38.05 |
| CDY08866 | Canola | nucleus | 38.61 | 37.77 |
| CDY03177 | Canola | nucleus | 43.06 | 37.53 |
| CDX67929 | Canola | nucleus | 40.56 | 37.29 |
| CDX77711 | Canola | nucleus | 42.5 | 37.18 |
| CDX79408 | Canola | nucleus | 40.28 | 37.18 |
| CDY33492 | Canola | nucleus | 40.83 | 36.93 |
| CDX85461 | Canola | cytosol | 34.72 | 35.46 |
| CDY42301 | Canola | nucleus | 32.92 | 34.35 |
| CDY67945 | Canola | nucleus | 32.78 | 34.25 |
| CDY43137 | Canola | nucleus | 32.36 | 33.82 |
| CDY62389 | Canola | cytosol | 22.92 | 33.74 |
| CDY02713 | Canola | nucleus | 34.44 | 33.56 |
| CDY53691 | Canola | nucleus | 32.92 | 33.38 |
| CDY44946 | Canola | nucleus | 30.0 | 33.33 |
| CDY39874 | Canola | plasma membrane | 8.89 | 33.33 |
| CDY69499 | Canola | cytosol | 13.61 | 32.24 |
| CDY16938 | Canola | nucleus | 29.44 | 32.12 |
| CDY49937 | Canola | nucleus | 30.83 | 31.99 |
| CDY21211 | Canola | nucleus | 30.56 | 31.7 |
| CDX89416 | Canola | nucleus | 28.19 | 31.28 |
| CDX94443 | Canola | cytosol | 26.25 | 30.1 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078EYY9 | EnsemblPlants:CDY06167 | ProteinID:CDY06167 |
| ProteinID:CDY06167.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00122062001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF513 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0004EE394C | SEG:seg | : |
Description
BnaA09g50360D
Coordinates
chrLK031968:-:78723..82810
Molecular Weight (calculated)
79490.3 Da
IEP (calculated)
5.629
GRAVY (calculated)
-0.370
Length
720 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEPNMLLAA MNNEDSNNHN YNHEVNNNNN EGFLRDDEFD SANTKSGSEN QEGGSGNDQD PLHPNKKKRY HRHTQLQIQE MEAFFKECPH PDDKQRKQLS
101: RELGLEPLQV KFWFQNKRTQ MKNHHERHEN SHLRAENEKL RGDNLRYREA LANASCPNCG GPTAIGEMSF DEHQLRLENA RLREEIDRIS AIAAKYVGKP
201: VSNYPLMSPP PLPPRPLELA MGNFGGDVYG NNPTDQFKCI TAPTESDKPV IIDLAVAAME ELIRMVQVDE PLWNSLVFDE EEYARTFPRG IGPKPAGFRS
301: EASRESVVVI MNHINIVEIL MDVNQWSMVF AGMVSRAMTL AVLSTGVAGN YNGALQVMTA EFQVPTPLVP TRETYFARYC KQQADGSWAV VDISLDSLQP
401: NPPVRCRRRA SGCLIQEMPN GYSKVTWVEH VEVDDRGVHD LYKHMVSTGH AFGAKRWVAI LDRQCERLAS VMATNISSGE VGVITNQEGR RSMLKLAERM
501: VISFCAGVSA STAHTWTTLS GTGAEDVRVM TRKSVDDPGR PPGIVLSAAT SFGIPVPPKR VFDFLRDENS RNEWDILSNG GVVQEMAHIA NGRETGNCVS
601: LLRVNSANSS QSNMLILQES CTDPTASFVI YAPVDIVAMN IVLNGGDPDY VALLPSGFAI LPDGNANGRG EGGSLLTVAF QILVDSVPTA KLSLGSVATV
701: NNLIACTVER IKASMSCETA
101: RELGLEPLQV KFWFQNKRTQ MKNHHERHEN SHLRAENEKL RGDNLRYREA LANASCPNCG GPTAIGEMSF DEHQLRLENA RLREEIDRIS AIAAKYVGKP
201: VSNYPLMSPP PLPPRPLELA MGNFGGDVYG NNPTDQFKCI TAPTESDKPV IIDLAVAAME ELIRMVQVDE PLWNSLVFDE EEYARTFPRG IGPKPAGFRS
301: EASRESVVVI MNHINIVEIL MDVNQWSMVF AGMVSRAMTL AVLSTGVAGN YNGALQVMTA EFQVPTPLVP TRETYFARYC KQQADGSWAV VDISLDSLQP
401: NPPVRCRRRA SGCLIQEMPN GYSKVTWVEH VEVDDRGVHD LYKHMVSTGH AFGAKRWVAI LDRQCERLAS VMATNISSGE VGVITNQEGR RSMLKLAERM
501: VISFCAGVSA STAHTWTTLS GTGAEDVRVM TRKSVDDPGR PPGIVLSAAT SFGIPVPPKR VFDFLRDENS RNEWDILSNG GVVQEMAHIA NGRETGNCVS
601: LLRVNSANSS QSNMLILQES CTDPTASFVI YAPVDIVAMN IVLNGGDPDY VALLPSGFAI LPDGNANGRG EGGSLLTVAF QILVDSVPTA KLSLGSVATV
701: NNLIACTVER IKASMSCETA
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.