Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G305200.1 | Wheat | nucleus | 99.37 | 99.37 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 98.74 | 98.5 |
| HORVU7Hr1G073440.1 | Barley | nucleus | 97.99 | 97.99 |
| HORVU7Hr1G073450.1 | Barley | mitochondrion, nucleus | 95.48 | 95.48 |
| Os08t0136100-01 | Rice | nucleus | 82.79 | 83.95 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 61.81 | 74.55 |
| Zm00001d024701_P001 | Maize | nucleus | 74.25 | 74.15 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 66.83 | 73.28 |
| EES14500 | Sorghum | nucleus | 74.75 | 73.1 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 68.84 | 72.39 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 65.83 | 72.18 |
| PGSC0003DMT400061859 | Potato | nucleus | 61.68 | 71.26 |
| KRH56105 | Soybean | nucleus | 64.07 | 69.96 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 67.96 | 69.63 |
| CDX90879 | Canola | nucleus | 62.56 | 69.55 |
| CDY21319 | Canola | nucleus | 62.44 | 69.41 |
| KRH25398 | Soybean | plastid | 66.21 | 69.25 |
| PGSC0003DMT400029291 | Potato | nucleus | 60.3 | 68.87 |
| Solyc03g031760.2.1 | Tomato | cytosol | 54.4 | 68.84 |
| KRH22554 | Soybean | nucleus | 66.83 | 68.12 |
| KRH26803 | Soybean | nucleus | 66.83 | 68.12 |
| Bra015401.1-P | Field mustard | nucleus | 61.56 | 68.06 |
| Solyc10g005330.2.1 | Tomato | nucleus | 60.8 | 67.98 |
| CDY06167 | Canola | nucleus | 61.43 | 67.92 |
| Bra032478.1-P | Field mustard | nucleus | 61.31 | 67.87 |
| AT1G05230.5 | Thale cress | nucleus | 61.43 | 67.82 |
| KRH77881 | Soybean | nucleus | 61.93 | 67.44 |
| KRH27601 | Soybean | nucleus | 61.93 | 67.35 |
| KRH13175 | Soybean | cytosol | 14.95 | 67.23 |
| GSMUA_Achr10P... | Banana | nucleus | 60.3 | 67.13 |
| CDY16639 | Canola | nucleus | 61.68 | 66.98 |
| CDY27417 | Canola | nucleus | 60.05 | 66.95 |
| CDX94586 | Canola | nucleus | 61.56 | 66.94 |
| CDX76399 | Canola | nucleus | 59.92 | 66.71 |
| PGSC0003DMT400005277 | Potato | nucleus | 61.43 | 66.71 |
| Bra000807.1-P | Field mustard | nucleus | 50.0 | 66.67 |
| AT4G04890.1 | Thale cress | nucleus | 62.06 | 66.49 |
| GSMUA_Achr11P... | Banana | plastid | 65.83 | 66.41 |
| Bra029527.1-P | Field mustard | nucleus | 62.06 | 66.31 |
| CDX98703 | Canola | nucleus | 57.79 | 66.19 |
| CDX94054 | Canola | nucleus | 57.66 | 66.04 |
| Solyc02g080260.2.1 | Tomato | nucleus | 62.06 | 65.78 |
| CDY10041 | Canola | nucleus | 61.43 | 65.46 |
| AT4G21750.3 | Thale cress | nucleus | 62.56 | 65.35 |
| CDY66622 | Canola | nucleus | 59.3 | 64.57 |
| Bra038757.1-P | Field mustard | nucleus | 58.04 | 63.72 |
| Bra020872.1-P | Field mustard | nucleus | 59.8 | 63.64 |
| CDX79091 | Canola | nucleus | 59.42 | 63.4 |
| CDY71572 | Canola | nucleus | 30.4 | 61.58 |
| Bra013556.1-P | Field mustard | nucleus | 53.14 | 61.3 |
| CDY49515 | Canola | plasma membrane | 61.93 | 60.79 |
| CDY46842 | Canola | nucleus | 61.81 | 59.28 |
| KRG91238 | Soybean | nucleus | 52.76 | 57.46 |
| CDY23096 | Canola | nucleus | 9.3 | 56.06 |
| KRH35579 | Soybean | nucleus | 52.64 | 53.86 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 41.71 | 48.47 |
| TraesCS6A01G255800.1 | Wheat | nucleus | 48.37 | 47.89 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 13.19 | 44.3 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 39.57 | 43.45 |
| TraesCS5A01G314400.2 | Wheat | nucleus | 46.23 | 43.35 |
| TraesCS7A01G168100.1 | Wheat | nucleus | 7.91 | 42.86 |
| TraesCS2A01G401200.3 | Wheat | nucleus | 42.71 | 42.5 |
| TraesCS3A01G305300.1 | Wheat | nucleus | 37.31 | 39.03 |
| TraesCS7A01G168000.1 | Wheat | nucleus | 6.66 | 38.97 |
| PGSC0003DMT400037397 | Potato | cytosol | 23.37 | 37.88 |
| TraesCS1A01G193400.1 | Wheat | nucleus, plastid | 40.95 | 37.34 |
| KRH22254 | Soybean | cytosol | 24.75 | 36.82 |
| Solyc10g006420.2.1 | Tomato | cytosol | 24.25 | 36.62 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 14.45 | 34.85 |
| TraesCS3A01G325800.1 | Wheat | nucleus | 27.39 | 31.92 |
| TraesCS4A01G072000.1 | Wheat | nucleus | 8.92 | 31.84 |
| TraesCS7A01G215300.1 | Wheat | nucleus | 6.53 | 30.41 |
| TraesCS5A01G330200.1 | Wheat | nucleus | 27.26 | 29.17 |
| TraesCS4A01G231300.2 | Wheat | nucleus | 28.27 | 29.15 |
| TraesCS7A01G215400.1 | Wheat | nucleus | 6.53 | 29.05 |
| TraesCS3A01G119200.1 | Wheat | nucleus | 6.53 | 28.73 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF349 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:TraesCS7A01G308400 | EnsemblPlants:TraesCS7A01G308400.1 | TIGR:cd00086 | TIGR:cd08875 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:436693693..436698045
Molecular Weight (calculated)
85522.1 Da
IEP (calculated)
6.430
GRAVY (calculated)
-0.346
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGMMIPGR NMIGRSNGAG VAYASSSSSA LSLGQNLMDG MHHHQLPAML QHQMVDHHLL LPQHHHHPHQ QAATSESDAR GPHGGGNNNS SNNNEELEMS
101: KSGTGSDNNL DGGEGGGGED DEQEDPAGQH PRKKKRYHRH TQHQIQELEA FFKECPHPDD KQRKELSRSL SLEPLQVKFW FQNKRTQIKT QHERQENTAL
201: RTENEKLRAE NMRYKEALAN ASCPNCGGPA AIGEMSFDEH HLRVENARLR DEIDRISAIA AKYVGGKPGA GVAVASAAYP PLPPQSSGRS ALDHLGMPSM
301: FGGAEFDKPM VIELAVAAME ELVRMAQLGE PLWVPSLDGE ALGEEEYARA FPRGALGPKS PELRSEASRE TDVVIMNHVS LVEMLMDVRQ WSALFSSIVS
401: RAATLDVLST GVAGNHDGAL QLMSAEFQMP SPLVPTRDTQ FLRYCKQHPG GAWAVVDVSL DGLRSAARVG GHFRRRASGC LIQEMPNGYS KVTWVEHVEA
501: GDDAMVHDLY RPLVNSGLAF GARRWTSTLK RQCERLASAM ATVPSSGGDV ITTAEGRRSM LKLAERMTAS FCGGVTASTT HQWTTLSGSG AEDVRVMTRK
601: SVDDPGRPPG IILNAATSFW LPVPPSRVFG FLRDDSTRSE WDILSNGGVV QEMAHIANGS HHGNAVSLLR VNNANSNQSN MLILQECCTD ATGSYVVYAP
701: VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GPAGAPDAGG SLLTVAFQIL VDSVPTAKLS LGSVATVNSL IACTVDRIKA AVVVSPGDNA GAATNR
101: KSGTGSDNNL DGGEGGGGED DEQEDPAGQH PRKKKRYHRH TQHQIQELEA FFKECPHPDD KQRKELSRSL SLEPLQVKFW FQNKRTQIKT QHERQENTAL
201: RTENEKLRAE NMRYKEALAN ASCPNCGGPA AIGEMSFDEH HLRVENARLR DEIDRISAIA AKYVGGKPGA GVAVASAAYP PLPPQSSGRS ALDHLGMPSM
301: FGGAEFDKPM VIELAVAAME ELVRMAQLGE PLWVPSLDGE ALGEEEYARA FPRGALGPKS PELRSEASRE TDVVIMNHVS LVEMLMDVRQ WSALFSSIVS
401: RAATLDVLST GVAGNHDGAL QLMSAEFQMP SPLVPTRDTQ FLRYCKQHPG GAWAVVDVSL DGLRSAARVG GHFRRRASGC LIQEMPNGYS KVTWVEHVEA
501: GDDAMVHDLY RPLVNSGLAF GARRWTSTLK RQCERLASAM ATVPSSGGDV ITTAEGRRSM LKLAERMTAS FCGGVTASTT HQWTTLSGSG AEDVRVMTRK
601: SVDDPGRPPG IILNAATSFW LPVPPSRVFG FLRDDSTRSE WDILSNGGVV QEMAHIANGS HHGNAVSLLR VNNANSNQSN MLILQECCTD ATGSYVVYAP
701: VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GPAGAPDAGG SLLTVAFQIL VDSVPTAKLS LGSVATVNSL IACTVDRIKA AVVVSPGDNA GAATNR
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.