Factsheet for TraesCS7A01G168000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G169000.1	Wheat	nucleus	92.65	84.56
TraesCS7A01G168100.1	Wheat	nucleus	91.18	84.35
TraesCS7A01G215300.1	Wheat	nucleus	21.32	16.96
TraesCS7A01G215400.1	Wheat	nucleus	21.32	16.2
TraesCS4A01G072000.1	Wheat	nucleus	26.47	16.14
TraesCS3A01G119200.1	Wheat	nucleus	21.32	16.02
TraesCS7A01G167900.1	Wheat	nucleus	46.32	8.69
TraesCS6A01G324500.1	Wheat	nucleus	43.38	8.61
TraesCS2A01G474000.1	Wheat	nucleus	38.24	6.69
TraesCS7A01G308400.1	Wheat	nucleus	38.97	6.66
TraesCS3A01G305300.1	Wheat	nucleus	36.03	6.44
TraesCS6A01G255800.1	Wheat	nucleus	37.5	6.34
TraesCS5A01G314400.2	Wheat	nucleus	37.5	6.01
TraesCS5A01G330200.1	Wheat	nucleus	29.41	5.38
TraesCS2A01G401200.3	Wheat	nucleus	31.62	5.38
TraesCS1A01G193400.1	Wheat	nucleus, plastid	33.82	5.27
TraesCS3A01G325800.1	Wheat	nucleus	24.26	4.83
TraesCS4A01G231300.2	Wheat	nucleus	27.21	4.79

Protein Annotations

EnsemblPlants:TraesCS7A01G168000.1	EnsemblPlantsGene:TraesCS7A01G168000	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	ncoils:Coil	PANTHER:PTHR24326
PANTHER:PTHR24326:SF504	PFAM:PF00046	PFscan:PS50071	SEG:seg	SMART:SM00389	SUPFAM:SSF46689
TIGR:cd00086	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:124409866..124410776

Molecular Weight (calculated)

15834.5 Da

IEP (calculated)

6.020

GRAVY (calculated)

-1.162

Length

136 amino acids

Sequence
(BLAST)

001: MDFGDHQQGG SDSQQQLQER RKRQRRHTPE QVQKLEESYK KSDHPSEIEC AQLGRELGLE TKQIEHERLE NRFLRWENMS LRSEIMAVRE ALKNSATCPN
101: CVGVAKDCID QQELNRENAR LNAGLLHCTT SFQEEP

Best Arabidopsis Sequence Match ( AT1G73360.1 )
(BLAST)

001: MSFVVGVGGS GSGSGGDGGG SHHHDGSETD RKKKRYHRHT AQQIQRLESS FKECPHPDEK QRNQLSRELG LAPRQIKFWF QNRRTQLKAQ HERADNSALK
101: AENDKIRCEN IAIREALKHA ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP LDLSMTSLTG CGPFGHGPSL
201: DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM
301: NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS
401: GCLIQDMPNG YSKVTWVEHI ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG KRSMMRLAQR MISNYCLSVS
501: RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM
601: LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN
701: LIGTTVHQIK TALSGPTAST TA

Arabidopsis Description

HDG11Homeobox-leucine zipper protein HDG11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.