Factsheet for TraesCS4A01G072000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G228800.1	Wheat	nucleus	91.03	94.86
TraesCS4B01G227900.1	Wheat	nucleus	92.38	92.38
TraesCS3A01G119200.1	Wheat	nucleus	69.96	86.19
TraesCS7A01G215400.1	Wheat	nucleus	68.61	85.47
TraesCS7A01G215300.1	Wheat	nucleus	55.16	71.93
HORVU3Hr1G022070.1	Barley	nucleus	59.64	70.37
TraesCS7A01G168100.1	Wheat	nucleus	20.18	30.61
TraesCS7A01G168000.1	Wheat	nucleus	16.14	26.47
TraesCS6A01G255800.1	Wheat	nucleus	34.98	9.7
TraesCS6A01G324500.1	Wheat	nucleus	28.25	9.2
TraesCS5A01G314400.2	Wheat	nucleus	34.08	8.95
TraesCS7A01G308400.1	Wheat	nucleus	31.84	8.92
TraesCS2A01G474000.1	Wheat	nucleus	30.49	8.75
TraesCS7A01G167900.1	Wheat	nucleus	28.25	8.69
TraesCS5A01G330200.1	Wheat	nucleus	28.25	8.47
TraesCS4A01G231300.2	Wheat	nucleus	27.35	7.9
TraesCS3A01G305300.1	Wheat	nucleus	26.46	7.75
TraesCS2A01G401200.3	Wheat	nucleus	26.91	7.5
TraesCS1A01G193400.1	Wheat	nucleus, plastid	29.15	7.45
TraesCS3A01G325800.1	Wheat	nucleus	21.97	7.17
Solyc11g022410.1.1	Tomato	extracellular	0.45	1.35

Protein Annotations

EnsemblPlants:TraesCS4A01G072000.1	EnsemblPlantsGene:TraesCS4A01G072000	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PANTHER:PTHR24326	PANTHER:PTHR24326:SF320
PFAM:PF00046	PFscan:PS50071	SEG:seg	SMART:SM00389	SUPFAM:SSF46689	TIGR:cd00086
MapMan:15.5.3.3	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:69510154..69511094

Molecular Weight (calculated)

26040.6 Da

IEP (calculated)

7.055

GRAVY (calculated)

-0.911

Length

223 amino acids

Sequence
(BLAST)

001: MDGDNSGVHN EFDLFMTSTH NHLFQHNHSD EMDDLPGAST IVGNTDDANV VVADHDNNDG ETHSEQTMAT RRAKYHRLCS EQIQQLEAYN TYSINVSVFW
101: DCPYPNEKLR KDLSERLGMS AQQVKFWFQN KRTFNKGKMQ RWETQNCWIE NKKLKTERQA IMLAMQNKTC LKCRGVMVQT QHTSEFQRLY TENMRLKEEL
201: LHATAYLKEG LRRNGMSLPS ARD

Best Arabidopsis Sequence Match ( AT4G00730.2 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTCP FLTHLSLCLT

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.