Factsheet for TraesCS7A01G168100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G072800.1	Wheat	nucleus	93.2	93.2
TraesCS7A01G168000.1	Wheat	nucleus	84.35	91.18
TraesCS7D01G169000.1	Wheat	nucleus	91.84	90.6
TraesCS7A01G215300.1	Wheat	nucleus	25.17	21.64
TraesCS7A01G215400.1	Wheat	nucleus	25.17	20.67
TraesCS3A01G119200.1	Wheat	nucleus	25.17	20.44
TraesCS4A01G072000.1	Wheat	nucleus	30.61	20.18
TraesCS7A01G167900.1	Wheat	nucleus	46.94	9.52
TraesCS6A01G324500.1	Wheat	nucleus	44.22	9.49
TraesCS7A01G308400.1	Wheat	nucleus	42.86	7.91
TraesCS2A01G474000.1	Wheat	nucleus	41.5	7.85
TraesCS6A01G255800.1	Wheat	nucleus	40.82	7.46
TraesCS3A01G305300.1	Wheat	nucleus	38.1	7.36
TraesCS5A01G314400.2	Wheat	nucleus	40.14	6.95
TraesCS2A01G401200.3	Wheat	nucleus	34.69	6.38
TraesCS1A01G193400.1	Wheat	nucleus, plastid	36.73	6.19
TraesCS4A01G231300.2	Wheat	nucleus	31.97	6.09
TraesCS3A01G325800.1	Wheat	nucleus	26.53	5.71
TraesCS5A01G330200.1	Wheat	nucleus	27.89	5.51

Protein Annotations

EnsemblPlants:TraesCS7A01G168100.1	EnsemblPlantsGene:TraesCS7A01G168100	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	ncoils:Coil	PANTHER:PTHR24326
PANTHER:PTHR24326:SF504	PFAM:PF00046	PFscan:PS50071	SEG:seg	SMART:SM00389	SUPFAM:SSF46689
TIGR:cd00086	MapMan:15.5.3.3	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:124456004..124456892

Molecular Weight (calculated)

17498.5 Da

IEP (calculated)

7.927

GRAVY (calculated)

-1.242

Length

147 amino acids

Sequence
(BLAST)

001: MDFGDHQQGG SDSQQQLQER RKRQRRHAQE QVQKLEESYK KYDHPNEIQC AQLGRELGLE TKQVRSWFQN HRTQIKIEHE RLENRFLRWE NTSLRSEIMA
101: VREALKNSAT CPHCVLKDCI DQQELNRENA RLKAGLLHCT TSFQDEP

Best Arabidopsis Sequence Match ( AT1G05230.10 )
(BLAST)

001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A

Arabidopsis Description

HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.