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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G168000.1 Wheat nucleus 84.56 92.65
TraesCS7B01G072800.1 Wheat nucleus 91.28 92.52
TraesCS7A01G168100.1 Wheat nucleus 90.6 91.84
TraesCS7D01G168900.1 Wheat nucleus 70.47 70.47
TraesCS4D01G228800.1 Wheat nucleus 30.2 21.03
TraesCS1D01G037100.1 Wheat nucleus 29.53 20.66
TraesCS3D01G121300.1 Wheat nucleus 28.19 20.19
TraesCS3D01G121500.1 Wheat nucleus 27.52 18.39
TraesCS7D01G217200.1 Wheat nucleus 26.17 17.49
TraesCS3D01G121400.1 Wheat golgi, nucleus 29.53 11.34
TraesCS7D01G168700.1 Wheat nucleus 48.32 9.84
TraesCS6D01G304300.1 Wheat nucleus 44.97 9.78
TraesCS7D01G305200.1 Wheat nucleus 44.3 8.29
TraesCS2D01G473700.1 Wheat nucleus 41.61 7.99
TraesCS6D01G237000.1 Wheat nucleus 41.61 7.71
TraesCS5D01G320600.1 Wheat nucleus 42.28 7.42
TraesCS2D01G398600.1 Wheat nucleus 36.91 7.02
TraesCS5D01G335900.1 Wheat nucleus 33.56 6.64
TraesCS1D01G197300.1 Wheat nucleus 37.58 6.34
TraesCS4D01G082600.1 Wheat nucleus 30.2 5.59
TraesCS3D01G319200.1 Wheat nucleus 25.5 5.56
TraesCS3D01G296500.3 Wheat nucleus 28.19 5.29
Protein Annotations
EnsemblPlants:TraesCS7D01G169000.1EnsemblPlantsGene:TraesCS7D01G169000Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:Homeobox_domInterPro:IPR001356PANTHER:PTHR24326PANTHER:PTHR24326:SF504
PFAM:PF00046PFscan:PS50071SEG:segSMART:SM00389SUPFAM:SSF46689TIGR:cd00086
MapMan:15.5.3.3:::::
Description
No Description!
Coordinates
chr7D:-:119760535..119761437
Molecular Weight (calculated)
17445.5 Da
IEP (calculated)
7.508
GRAVY (calculated)
-1.138
Length
149 amino acids
Sequence
(BLAST)
001: MDIGDHQQGG SDSQQQLQES RKRQRRHTPE QIQKLEESYK KSDHPNEIQC AQLGRELGLE TKQVRSWFQN HRTQIRIEHE RLENRFLRWE NMSLRAEIMA
101: VREALKNSAT CPNCLGVAKD CIDQQELNRE NARLKAGLLH CTTSIQDEP
Best Arabidopsis Sequence Match ( AT1G73360.1 )
(BLAST)
001: MSFVVGVGGS GSGSGGDGGG SHHHDGSETD RKKKRYHRHT AQQIQRLESS FKECPHPDEK QRNQLSRELG LAPRQIKFWF QNRRTQLKAQ HERADNSALK
101: AENDKIRCEN IAIREALKHA ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP LDLSMTSLTG CGPFGHGPSL
201: DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM
301: NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS
401: GCLIQDMPNG YSKVTWVEHI ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG KRSMMRLAQR MISNYCLSVS
501: RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM
601: LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN
701: LIGTTVHQIK TALSGPTAST TA
Arabidopsis Description
HDG11Homeobox-leucine zipper protein HDG11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX31]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.