Factsheet for TraesCS7D01G168900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G035250.1	Barley	nucleus	85.91	85.91
TraesCS7D01G169000.1	Wheat	nucleus	70.47	70.47
Solyc04g025740.1.1	Tomato	nucleus	34.9	35.14
TraesCS1D01G037100.1	Wheat	nucleus	30.2	21.13
TraesCS3D01G121300.1	Wheat	nucleus	28.19	20.19
TraesCS4D01G228800.1	Wheat	nucleus	28.86	20.09
TraesCS3D01G121500.1	Wheat	nucleus	26.85	17.94
TraesCS7D01G217200.1	Wheat	nucleus	26.17	17.49
TraesCS3D01G121400.1	Wheat	golgi, nucleus	29.53	11.34
TraesCS6D01G304300.1	Wheat	nucleus	46.98	10.22
TraesCS7D01G168700.1	Wheat	nucleus	48.99	9.97
TraesCS2D01G473700.1	Wheat	nucleus	39.6	7.6
TraesCS6D01G237000.1	Wheat	nucleus	40.94	7.59
TraesCS7D01G305200.1	Wheat	nucleus	40.27	7.54
TraesCS5D01G320600.1	Wheat	nucleus	40.27	7.07
TraesCS2D01G398600.1	Wheat	nucleus	35.57	6.76
TraesCS5D01G335900.1	Wheat	nucleus	32.21	6.37
TraesCS1D01G197300.1	Wheat	nucleus	36.91	6.23
TraesCS4D01G082600.1	Wheat	nucleus	32.21	5.96
TraesCS3D01G319200.1	Wheat	nucleus	25.5	5.56
TraesCS3D01G296500.3	Wheat	nucleus	27.52	5.16

Protein Annotations

EnsemblPlants:TraesCS7D01G168900.1	EnsemblPlantsGene:TraesCS7D01G168900	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PANTHER:PTHR24326	PANTHER:PTHR24326:SF236
PFAM:PF00046	PFscan:PS50071	SEG:seg	SMART:SM00389	SUPFAM:SSF46689	TIGR:cd00086
MapMan:15.5.3.3	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:119746827..119747585

Molecular Weight (calculated)

17686.8 Da

IEP (calculated)

6.131

GRAVY (calculated)

-1.134

Length

149 amino acids

Sequence
(BLAST)

001: MDMGDHQEGG SDSQQQLQER RKRQRRHTPE QIRKLEESFQ KCGYPDEAQS AQLGRELGLE NKQIRSWFQN HRTQMKVEYE RAENLFLREE NTRLLSENMV
101: MREVLKNFIC LNPNCIAKHY IDQQEELDKE NARLKAGSLL CATSFQDEL

Best Arabidopsis Sequence Match ( AT4G00730.2 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTCP FLTHLSLCLT

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.