Factsheet for TraesCS1D01G037100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G244000.1	Wheat	nucleus	90.61	93.69
HORVU1Hr1G005430.1	Barley	nucleus	73.24	71.56
TraesCS4D01G228800.1	Wheat	nucleus	62.44	62.15
TraesCS3D01G121300.1	Wheat	nucleus	58.22	59.62
TraesCS3D01G121500.1	Wheat	nucleus	61.5	58.74
TraesCS7D01G217200.1	Wheat	nucleus	54.46	52.02
TraesCS3D01G121400.1	Wheat	golgi, nucleus	64.32	35.31
TraesCS7D01G168900.1	Wheat	nucleus	21.13	30.2
TraesCS7D01G169000.1	Wheat	nucleus	20.66	29.53
TraesCS5D01G335900.1	Wheat	nucleus	33.33	9.43
TraesCS6D01G304300.1	Wheat	nucleus	29.58	9.2
TraesCS6D01G237000.1	Wheat	nucleus	33.8	8.96
TraesCS5D01G320600.1	Wheat	nucleus	35.21	8.83
TraesCS7D01G305200.1	Wheat	nucleus	31.46	8.42
TraesCS2D01G473700.1	Wheat	nucleus	30.52	8.38
TraesCS7D01G168700.1	Wheat	nucleus	28.17	8.2
TraesCS1D01G197300.1	Wheat	nucleus	31.92	7.7
TraesCS4D01G082600.1	Wheat	nucleus	28.64	7.58
TraesCS2D01G398600.1	Wheat	nucleus	27.23	7.4
TraesCS3D01G296500.3	Wheat	nucleus	26.76	7.18
TraesCS3D01G319200.1	Wheat	nucleus	21.6	6.73
Solyc11g022410.1.1	Tomato	extracellular	0.47	1.35

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF00046
ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF320	SMART:SM00389	SUPFAM:SSF46689
EnsemblPlantsGene:TraesCS1D01G037100	EnsemblPlants:TraesCS1D01G037100.1	TIGR:cd00086	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:+:17265163..17267239

Molecular Weight (calculated)

24707.1 Da

IEP (calculated)

7.763

GRAVY (calculated)

-0.994

Length

213 amino acids

Sequence
(BLAST)

001: MDGEWPQYNS VVHNDLDPFM TSQHSHLLQH DHGDETYGLL GATANVGMID NTNVVAGNQG NNNVETYSEQ RMETRRTNYH RLRREQIQQL EAVFQEIPYP
101: DEKLRKSLSK RLGMSAQQVK FWFQNHRSNS KGKTQRRETT TLQLENQMLK SDREAIMSAM ENSTCLKCRG AVVQTQDTSE RHSLFKENMK LKEELRLAAT
201: HLKEGLQQNG MWP

Best Arabidopsis Sequence Match ( AT4G00730.2 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTCP FLTHLSLCLT

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.